Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_2012
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Entry
BBDE_2012 CDS
T04222
Name
(GenBank) 4-aminobutyrate aminotransferase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00250
Alanine, aspartate and glutamate metabolism
bdn00280
Valine, leucine and isoleucine degradation
bdn00310
Lysine degradation
bdn00410
beta-Alanine metabolism
bdn00640
Propanoate metabolism
bdn00650
Butanoate metabolism
bdn01100
Metabolic pathways
bdn01120
Microbial metabolism in diverse environments
Module
bdn_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BBDE_2012
00650 Butanoate metabolism
BBDE_2012
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BBDE_2012
00280 Valine, leucine and isoleucine degradation
BBDE_2012
00310 Lysine degradation
BBDE_2012
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BBDE_2012
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdn01007
]
BBDE_2012
Enzymes [BR:
bdn01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
BBDE_2012
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
BBDE_2012
2.6.1.48 5-aminovalerate transaminase
BBDE_2012
Amino acid related enzymes [BR:
bdn01007
]
Aminotransferase (transaminase)
Class III
BBDE_2012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAQ28006
LinkDB
All DBs
Position
complement(2446394..2447728)
Genome browser
AA seq
444 aa
AA seq
DB search
MSVPQVARKIVTAIPGPKSEALKAEHTRYVSAGVGQGMPVFAETASGSTITDVDGNRFID
LASGIAVTGVGNCAPEVVAAVQEEVAKLTHTNFATTPYANYIEVCKKLDEHTPGDFAKKS
VLVNSGAEAVENAIKIARKYTGRSAIVVMENAFHGRTNLTMAMTTKSMPYKQGFGAFAPD
VFRVPFSYPLRDDFGADGAAAAKAAAAKIELLVGSANVAAVIAEPIQGEGGFIVPAEGFL
SGLAEWAHAHDVLYISDEIQAGFCRSGKWFACEYDGVVPDLITTAKALGGGMPIAAVTGR
AEIMDAVQPGGIGGTYGGNPVSCAASLAAIGIMEEQDLPAKAAHIGEVVESVLGPLVDEV
PAVAEVRGRGAMIGVEFVKPGTMEPNKELVGRIAKRTIQEGLIMLTCGINGNVIRLLPPL
VITDDELNEALAVLKEIIVEESAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcccacaggtagcacgcaagatcgtcaccgccattccgggcccgaagtccgaa
gccctcaaggccgaacatacccgctatgtcagcgccggcgtcggccagggcatgccggtg
ttcgccgagaccgcaagcggctccaccatcaccgacgtggacggcaaccgcttcatcgac
cttgcctctggcatcgccgtgaccggtgtcggcaactgcgcgccggaagtcgtcgcggcc
gtgcaggaggaagtggctaagctcacccacaccaacttcgccaccaccccgtacgccaac
tacatcgaggtgtgcaagaagctcgacgaacacactccgggcgactttgccaagaagagc
gtactggtcaactccggcgccgaagccgttgagaacgccatcaagatcgcccgcaagtac
accggccgctccgccatcgtagtgatggagaatgcgttccacggccgcaccaacctgacc
atggccatgaccaccaagtccatgccgtacaagcagggcttcggtgcgttcgcccccgac
gtcttccgcgtaccgttctcctatccgttgcgcgacgacttcggtgcggacggtgcggcc
gccgcgaaggccgccgccgccaagatcgagctgctggtcggctccgccaacgtggccgcc
gtgatcgccgaaccgattcagggcgaaggcggcttcatcgtgccggccgaaggcttcctg
tctggattggccgaatgggctcacgcgcatgacgtgctgtacatctccgacgagattcag
gcaggcttctgccgctctggcaaatggttcgcctgcgagtacgacggcgtcgttcctgac
ctgatcaccactgccaaggcactcggcggcggcatgccgattgcggccgtgaccggtcgc
gccgagatcatggacgccgtgcagcccggcggcatcggcggcacctacggcggtaacccg
gtttcctgcgccgcttctcttgcggcaatcggcattatggaggagcaggatctgccggca
aaggccgcacatatcggtgaggtcgtcgaatccgtactcggtccgctggtcgacgaagtg
ccggcggtggccgaagtacgcggccgcggcgccatgatcggtgtcgaattcgtcaagccg
ggcaccatggagccgaataaggagctggtcggccgcatcgccaagcgcaccatccaagaa
ggtctgatcatgctgacctgcggcatcaacggcaacgtaatccgcttgctgccgccgctg
gtcatcaccgatgacgagctgaacgaagcgctggcggtactcaaggagatcatcgtcgag
gaaagcgccaagtaa
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