Phocaeicola dorei HS1_L_1_B_010: EL88_02200
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Entry
EL88_02200 CDS
T03262
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EL88_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdo03400
]
EL88_02200
Enzymes [BR:
bdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EL88_02200
DNA repair and recombination proteins [BR:
bdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EL88_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_CRR
Helicase_C
PriA_C
nSTAND3
zinc-ribbons_6
DUF4230
Tudor_5
RecA
DUF1272
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AII62061
LinkDB
All DBs
Position
525356..527818
Genome browser
AA seq
820 aa
AA seq
DB search
MKKFVDVIVPLPIANQYTYSLPQEMEEMVQIGCRVIVPFGKKKFYTAIVANVHYAAPEGY
ETKDIAEVLDSSPVLLPKQYEFWQWLAEYYLCTLGDVYKAAIPSGMKLESETLVEYNPDF
ETTAPLPEKEQKILDLLSRDTEQCVTQLEKNSGLKNVLTVIKSLLDKEAIFVKEELKRNY
KPRTEARVRLVNGEADEAYLQRLFNELSRAPKQLMILMKYVELSGWVTKGYALKEVTKKE
LLEKSGGSVAVFNGLVEKKVFEVYHQEIGRLDKGILDTGDINPLNIAQQQAYSNILQCFR
EKNVCLLHGVTSSGKTEIYIHLIQEVLKTGKQVLYLLPEIALTTQITERLKRVFGHRLGI
YHSKFPDAERVEIWQKQLGEKSYDVILGVRSSIFLPFRNLGLVIIDEEHENTYKQQDPAP
RYHARSSAIMLASMFKAKVLLGTATPGVETYFNATSGKYGLVELKERYKDIRLPHIELVD
IKELAHQKRMQGPFSPVLVKQIKEALERKEQVILFQNRRGFAPMIECHTCGWVPKCKNCD
VSLTYHKGLNQLTCHYCGYTYQVPRSCPACGGVELMHRGFGTERIEDDIKLIFPEAKVAR
MDLDTTRTRTAYEKIITNFELGKTDILIGTQMVSKGLDFDHVSVVGILNADTMLNFPDFR
SYERAFQLMAQVAGRAGRKNKQGLVILQTKSPDLPVIHQVIHNDYEQLYYDQLAERQMFK
YPPYYRLIYVYLKHRKEDVLDLAADTMAAQLRSGLGDRVLGPDKPPVARIQTLFIKKMIV
KVEQNASIKKVRDYLLAVQRAILEDERFRSLLVYYDVDPQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattcgtagatgtcatagttccattacctattgccaaccaatacacttattcc
cttcctcaggagatggaagagatggtacagattggttgtcgggtgattgttccgtttgga
aagaaaaagttctatacggcaatagtggcaaatgtacattatgcggccccggaggggtat
gaaacgaaggatatagctgaagtgctagattcatctccggtactgttaccgaaacaatat
gagttctggcaatggctggcggaatattatctttgtacattaggagatgtgtacaaggcg
gctatcccttcgggtatgaaactggaaagcgaaacgttggtggaatataatcccgatttt
gagaccaccgcaccgttaccggagaaagagcagaaaattctagatttgttgagtcgggat
acagaacagtgtgtaacccagttggaaaaaaacagcggactgaaaaatgtgttgactgtc
atcaagtctttgttggacaaagaagccatttttgtcaaggaggaactgaaacgtaattac
aaaccgcgtactgaggcgagggtgagattggtgaacggagaagcggatgaggcttactta
caacggctgttcaatgaattgtcacgtgctcctaaacaattgatgatattaatgaagtat
gtggaattgtccggttgggtaaccaaagggtatgctttaaaggaagtaacaaagaaagag
ctgcttgaaaagtcaggaggttctgttgccgtttttaacggattggtcgaaaagaaagtc
tttgaggtctatcatcaggagataggacgtttggataaaggaattttggataccggtgat
attaatccgctgaatattgcgcagcaacaggcctatagcaacattcttcaatgcttcaga
gagaaaaatgtgtgtcttctgcatggtgttacatccagtggcaagacggaaatttatatc
cacctcattcaggaggtgctgaaaacaggaaagcaagtcttatatttgcttccggaaatt
gcactgaccactcagataactgagcgtttgaaaagggtgttcggacatcggctgggtatt
tatcattccaagtttccggacgctgagcgggtggagatatggcagaaacagttgggagag
aagagctatgacgtgattctcggagtccgttcctctatttttctgccttttcgtaatttg
gggctggtcatcatagatgaggaacacgagaatacgtataaacagcaagaccccgcccca
cgttaccatgcccgtagttcagccatcatgctggcttctatgttcaaggcgaaagtgctg
ttgggaacggctactcctggtgtggaaacttactttaatgctacctcgggaaagtatggc
ttggtagaattgaaagaaagatataaagatatccggcttcctcatatagaactggttgac
attaaggaactggcgcatcaaaagcggatgcaggggcctttctcaccggtgctggtcaag
cagataaaagaggcattggagcgtaaggagcaggttatcctgtttcagaaccgtcgcggt
ttcgctccaatgatagaatgtcatacctgcggctgggttcctaaatgcaagaactgtgat
gtgagtctgacgtatcataaggggctgaaccagctgacttgccattactgcggatatacc
tatcaagttccccgttcctgcccggcgtgcggtggagtggaattgatgcatcgcggtttc
ggtacagagcgtatagaagatgatataaaactgatattccccgaggcgaaagtcgcccgg
atggacttggataccacccgtacccgtaccgcatacgagaaaattatcacgaattttgaa
ctgggcaagacggacattctgattggtactcagatggtatccaaaggattggactttgat
catgtcagtgtggtggggattctgaatgctgatacgatgttgaacttcccggacttccgg
agctatgagcgtgctttccaactgatggcccaagtggcaggacgtgccgggcgtaaaaat
aagcaaggactggtcatccttcagaccaaatcgccggatttgcctgttattcatcaagtg
atacataatgattatgaacaattatactacgatcaattggcagaacggcagatgtttaag
tatccgccttactatcgtttgatttatgtatatttgaaacatcgcaaagaagatgttctg
gatctggcggcggataccatggcagcacagctccgttccggattgggcgacagggtattg
ggcccggacaaaccaccggttgcccgtatccagaccttatttataaagaaaatgattgtg
aaagtggagcagaatgcttctataaagaaagtgcgtgattatctgcttgccgtgcaacgt
gctatattggaagatgaacgttttcgttcgttgttagtatattatgatgtagatccacaa
taa
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