Bdellovibrio sp. ZAP7: DOM22_11800
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Entry
DOM22_11800 CDS
T06441
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DOM22_11800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_11800
Enzymes [BR:
bdz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DOM22_11800
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DOM22_11800
DNA repair and recombination proteins [BR:
bdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DOM22_11800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QDK45781
UniProt:
A0A514XJ33
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All DBs
Position
complement(2410049..2410867)
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AA seq
272 aa
AA seq
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MPELPEVEVVRKGLEEILKKEPTLLDIELKRPDLRDPIPLKKLKTLIGQKVRKVERRAKY
LLIWTDKGGMLSHLGMTGTWRVAEKGDERLHDHIYLHFSGGLRLAYRDPRRFGIFDFVAA
DDVAVHPRLKILGPEPLSAEFTGESLWQSLRNKQIALKVAIMDQKIVVGVGNIYASEALF
AAKIKPTLPAKKLSLERANLLVKEIRRILAESIKKGGSSISDFAQTSGESGYFQNTFKVY
DRAGQPCVVCKQQIKSKVMGGRNTFWCGHCQK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaggtcgaagtcgtccgtaaggggctggaagaaattcttaaaaaa
gaaccgacgcttttagatattgagctcaaacgtccggatttgcgcgatccgattccgcta
aaaaaactaaaaactttgattggtcagaaggttcgcaaggtcgagcgtcgcgctaagtat
cttttgatttggaccgacaagggcgggatgctttcacatttgggaatgacggggacgtgg
cgagtcgcggagaagggtgatgaacggttgcatgatcacatctatttgcacttttcaggt
ggtttgcgcttggcttaccgtgatccgcgccggtttgggatttttgactttgtggccgca
gacgatgttgctgtgcatccaagactgaagatcttggggcctgagccgctgagtgctgaa
tttacaggcgaatctttgtggcagagtttgcgcaataaacagatcgctttaaaggtcgcc
attatggatcaaaaaatcgttgtcggggtggggaacatttacgcgagcgaagcgcttttt
gccgcaaaaattaaacccactttgcctgcaaaaaaactctctcttgagagagcaaattta
ctcgtaaaagagatccgtcgcattcttgctgagagcataaaaaaaggtggttcttcgatc
agtgattttgcccaaacttcgggcgaaagcgggtactttcaaaacactttcaaagtgtat
gatcgcgcgggacagccctgtgttgtatgcaaacaacagatcaaatcgaaagtgatgggc
ggtcgaaatactttttggtgcggacattgtcagaaataa
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