Pseudobdellovibrio exovorus: A11Q_1396
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Entry
A11Q_1396 CDS
T02492
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A11Q_1396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bex03400
]
A11Q_1396
Enzymes [BR:
bex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A11Q_1396
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A11Q_1396
DNA repair and recombination proteins [BR:
bex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A11Q_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AGH95612
UniProt:
M4V898
LinkDB
All DBs
Position
complement(1417006..1417827)
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AA seq
273 aa
AA seq
DB search
MPELPEVEIVCRNLREMIPVKTKIKNWEFYRKDLRYLIPKKDLQKLIGLPLQAISRRAKY
ILFEFQEFMLISHLGMTGSWRLERKGWDKRTHDHLAFELSGGRWFVYEDARRFGFVEVIR
RDDYLKRFQNLGAEPLDRDVDFSGLTEKFSKLSAPIKCALMNQKLLVGVGNIYASEILFK
VGVSPLRPCVQIKSQEYDKIWKETRMTLLRSIEKGGSTIENYRNSYGESGNYQNEFFVYG
KEGESCHSNCGGKIRSIVQAGRSTYWCPVCQKK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcctgaagttgaaattgtgtgtcgcaatttaagagagatgattcctgtt
aaaacgaaaattaagaactgggaattttatcgaaaagatttgcgatatcttattcccaaa
aaagatctgcagaagttgatcgggcttcctttgcaggccatcagtcgacgtgcaaaatat
attctattcgagtttcaagagtttatgctgatctcgcatttaggtatgacggggtcatgg
aggctagagcgtaagggatgggacaagcggacccatgatcatttggcttttgagctttcg
ggtggccgttggtttgtttatgaggatgcccgtcggtttggttttgttgaggttatcagg
agggatgactatttaaagagatttcaaaacctaggggcggagcccttggatcgggatgtg
gatttttctggtttgacggaaaaattttccaaattaagcgcgcccataaagtgtgcactg
atgaatcaaaagttattggttggggttgggaatatctatgcttccgagattctatttaaa
gtcggggtcagtcctttgcgcccatgtgtgcaaattaagtcacaggaatacgataaaatc
tggaaagaaacgcggatgaccttattgaggtcgattgaaaagggaggttcgaccatagaa
aactatagaaacagctatggtgaatcgggaaattatcaaaatgaattttttgtttatggt
aaagagggggaatcttgccacagtaattgtgggggtaaaattcgatcgatcgtccaagcg
ggaagatcgacttattggtgtcccgtttgccaaaaaaagtaa
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