Bacteroides finegoldii: BFINE_03410
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Entry
BFINE_03410 CDS
T09648
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bfin
Bacteroides finegoldii
Pathway
bfin00470
D-Amino acid metabolism
bfin00550
Peptidoglycan biosynthesis
bfin01100
Metabolic pathways
bfin01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BFINE_03410 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BFINE_03410 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BFINE_03410 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfin01011
]
BFINE_03410 (ddl)
Enzymes [BR:
bfin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BFINE_03410 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
bfin01011
]
Precursor biosynthesis
Amino acid ligase
BFINE_03410 (ddl)
BRITE hierarchy
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATP-grasp_4
CPSase_L_D2
GARS_A
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
BDW74546
LinkDB
All DBs
Position
complement(286469..287443)
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AA seq
324 aa
AA seq
DB search
MKRNIAIVAGGDTSEIVVSLRSAQGIYSFIDKEKYNLYIVEMEGRRWEVQLPDGNKVPVD
RNDFSFTNGTEKVVFDFAYITIHGTPGEDGRLQGYFDMLRIPYSCCGVLAAAITYDKFAC
NQYLKAFGVRIAESLLLRQGQSVSDEDVIEKIGLPCFIKPSLGGSSFGVTKVKTKEQIQP
AVVKAFGEAEEVIVEAFMEGTELTCGCYKTKEKSVVFPPTEVVTHNEFFDYDAKYNGQVD
EITPARISPELTGRVQKLTSAIYDILGCSGIIRVDYIVTAGEKLNLLEVNTTPGMTATSF
IPQQVRAAGLDIKDVMTDIIENKF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaacattgctatcgtagcaggaggtgatacctctgaaatcgtagtttccctg
cgtagcgcacagggtatttattcctttatagataaggagaagtataatttgtacattgta
gagatggaaggccgccgctgggaagtacaattaccggacggcaacaaggttccggtggac
agaaatgattttagttttacgaacggaacggaaaaggtggtgttcgattttgcttatatt
acgattcatggcacaccgggtgaggatggtcgtctgcagggatattttgatatgctgcgc
attccgtattcctgttgtggagtattggcggctgctattacatacgataaatttgcctgc
aatcagtatttgaaggcttttggcgtacgtattgccgaatcgttgctgctgcgtcaagga
cagtcggtttccgacgaagatgtaatagagaagatcggtctgccttgttttatcaagccc
agtctgggaggttcgagctttggcgttacaaaagtgaagacaaaagaacaaatccagcct
gccgttgtcaaagctttcggagaagcggaagaagtgatcgttgaggcatttatggaaggt
acggagctgacttgcggttgctacaagacgaaggaaaaatcggtcgtcttcccacctacg
gaagtagttacccacaatgaatttttcgattacgatgctaaatataacggtcaggtagat
gaaatcactcctgcgcgtatctccccggaactgaccggacgcgtgcagaaactgacttcg
gctatctatgatatattgggctgttccggtattatccgtgtggattatattgtgactgcc
ggtgagaaactgaatcttctcgaagtgaatacgactccgggaatgactgctacaagcttt
attccccagcaggtgcgtgcagccggactggatataaaggatgtgatgactgatattatc
gaaaataaattttaa
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