Paraburkholderia fungorum: OI25_4532
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Entry
OI25_4532 CDS
T03799
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OI25_4532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_4532
Enzymes [BR:
bfn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OI25_4532
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OI25_4532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
Motif
Other DBs
NCBI-ProteinID:
AJZ61523
LinkDB
All DBs
Position
2:631202..632731
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AA seq
509 aa
AA seq
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MKRIPIEPSFATWRRAARVLLRQGIEPLQVEWVESEAEAGAATPGVPTTESAFATAGASG
PAIAAAAPGLATPVIPRELLSWLKTAACFRAPDRWALLYRVLWRWTRSERNVLDPSDPDG
ALLDQRIRTIERETEDLLTLTLFRRRDPSMGPPEFVGWYEPHHDLLERAAVRFAGSMGNS
TWMLATPHGAVFWNGMLLRIDRPLLAQCEQAEPAFAAIAAGALSGEAVTSTPTEALWLAY
YSNAVNSLPSPVPLRYWRMPPAGPPLPAHLARERSRLGAQSAAVTVPRKPPVEYSAVTPP
LQEPTGPLATCRRCALWRNAKQAVAGAGPAPAAIMVIGEQPGEDENQHGEPFTGPAGQLL
DTVLARAGLERQALYLTYAVKHYKWETLDQQRVHRTPVWRELEACQYWLEKELARVAPRV
IVALGATALQTLTGAHVNLSEYLGQTIAHDGRLIVPTWHPSYALGMVDATLRNDIVATIA
AAFSRAAALAEGSAPAQGEQVRDRPETQR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcattccgatcgaaccgtctttcgctacatggcggcgtgccgcgcgggtactg
ctgcggcaaggtatcgagccgctacaggtcgagtgggtcgagtccgaagctgaagcgggg
gctgcaacgccgggcgtgccgactactgaatccgcgttcgccacggcgggtgcctccggc
ccagcaatcgccgccgctgccccgggcctcgccacgcccgtgattccgcgcgaactgctc
tcctggctgaaaacggcggcgtgcttccgcgcgccggaccgctgggcgctgctgtaccgc
gtcctttggcgctggacgcgcagcgagcgcaatgtcctagaccccagcgacccggacggc
gcgctgctggatcagcgcatccgcactatcgagcgcgaaaccgaagacctgctgacactc
accttgttcagacggcgtgatccgtcgatggggccacccgaattcgtcggctggtacgag
ccgcatcacgacttgctggagcgtgccgccgtgcgcttcgccgggagcatgggcaattcc
acgtggatgctggccacgccgcacggcgcggtgttctggaacggcatgctactgcgcatt
gaccggccgttactggcgcaatgcgagcaagccgagcctgcgttcgcggccattgcggcc
ggtgcactcagtggcgaagccgtcaccagcacacccaccgaggcgctctggctcgcgtac
tacagcaacgccgtcaacagcctgccgtcgccggtgccgctgcgttactggagaatgccg
ccggcaggcccaccgctgcccgcacatctcgcgcgcgaacgcagccgtctcggcgcgcaa
agcgcggctgtcaccgttccccgcaaaccgccggtcgagtattcggccgtgacgcccccc
ttgcaggagcccaccggcccgctcgccacctgccggcgctgcgcgttatggcgcaacgcg
aaacaggcggtggcgggcgccgggcccgcacctgcggcgatcatggtgatcggcgaacag
ccgggcgaagacgagaaccagcatggcgagcccttcaccggaccggcaggccaactgctg
gacaccgtgctggcgcgcgccggcctcgagcgccaagcgctgtatctgacgtatgccgtc
aagcattacaaatgggaaacgctcgaccagcaacgcgttcatcgcacacccgtgtggcgc
gaactggaggcttgtcagtactggctggaaaaagaactggcgcgggtcgcgccgcgcgtc
atcgtcgcactcggcgcgacggcgttgcaaacactgaccggcgcgcacgtcaatctgtcc
gaataccttggtcaaaccattgcccacgacgggcgcctgatcgtaccgacctggcatccg
tcgtatgcgctaggaatggtcgacgccacattgcgcaacgacatcgtggcgaccatcgca
gcggcgttcagccgcgcagcggcactggcagagggcagcgcgcccgctcaaggtgagcag
gttcgggataggccagagacacaacggtga
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