Paraburkholderia fungorum: OI25_5245
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Entry
OI25_5245 CDS
T03799
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03030
DNA replication
bfn03410
Base excision repair
bfn03420
Nucleotide excision repair
bfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OI25_5245 (polA)
03410 Base excision repair
OI25_5245 (polA)
03420 Nucleotide excision repair
OI25_5245 (polA)
03440 Homologous recombination
OI25_5245 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfn03032
]
OI25_5245 (polA)
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_5245 (polA)
Enzymes [BR:
bfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OI25_5245 (polA)
DNA replication proteins [BR:
bfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OI25_5245 (polA)
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OI25_5245 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OI25_5245 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AJZ61371
LinkDB
All DBs
Position
2:complement(1419911..1422652)
Genome browser
AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPEGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYADYKANRPSMPEDLARQIEPIHVAVRALGWPLLMIEGVEADDV
IGTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDREGVIAKFGVPPERII
DYLSLIGDTVDNVPGVEKCGPKTAIKWLTQYETLDGIVAHADEIKGAVGDNLRRALDFLP
MAKKLVTVERQCDLTGHIVSMEESLQSRPESREELRDVFTRNGFKTWLREVEIADAVEGP
ETDVPPALTVDHERHYDTVQSWEQFDAWLEKISAAGLTAFDTETTSLDPMTAQIVGLSLS
VEPGRAAYVPLAHRGPDAPVQLPRDEVLAKLKPWLESAEHKKVGQHMKYDEQVLANYGIE
MRGVEHDTLLESYVLESHRTHDMDSLALRHLGIKTIKYEEVAGKGASQIGFDEVALDKAA
EYAAEDADITLRLHQALYPQVAAEKTLDYVYRDIEVPTSRVLRKMERTGVLIDAEKLRAQ
SSEIATRLIQLESEAYELAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTAEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSQGEDIHR
ATAAEIFSVTPLEVSSDQRRVAKVINFGLIYGMSAFGLAANLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKSKGYVETAFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQNWIEESKVGTRMIMQVHDELILEVPDAELSDVRKRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcggacccgaaggtggtccgacgggg
gcgctctatggaatgatcaacatgctgcggcgcatgcgcaaggaagtcaccgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgttccgcgacgactggtatgccgactat
aaggcgaaccgcccgtcgatgccggaagacctcgctcgccagatcgagccgattcacgtc
gccgtgcgcgcgctcggctggccgctgctgatgatcgagggcgtcgaagcggatgacgtg
atcggcacgctcagcaccgaagccgagaagcgcggtatgaatgtgatcgtgtcgactggg
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgacgaac
gagaagctcgaccgcgaaggcgtgatcgccaaattcggcgtgccgccggaacgcatcatc
gactacctgtcgttgatcggcgataccgtcgacaacgtgccgggcgtcgagaaatgcggc
ccgaaaacggccatcaaatggctcacgcagtacgagacactcgacggcatcgtcgcacat
gcggacgaaatcaaaggtgcggtaggagacaatctgcgacgtgcgctcgattttctgccc
atggcgaagaaactcgtcaccgtcgagcggcaatgcgatctgaccggccacatcgtgtcg
atggaagagagcctgcaaagccggccggaatcgcgtgaggaactgcgcgacgtgttcacg
cgcaatggtttcaagacctggctgcgcgaagtggaaatcgccgatgctgtggaaggtccc
gagaccgacgtgccgccggcgcttaccgtggatcatgaacgtcactacgacaccgtgcag
agctgggagcagttcgacgcgtggctcgagaaaatcagcgccgccgggttgacggcgttc
gataccgaaaccacctcgctcgatccgatgaccgcgcaaatcgtcggcttgtcgctgtcg
gtcgaacctggccgcgcggcttatgtgccgctcgcgcaccgtggcccggacgcgcccgtg
caattgccgcgcgacgaagtgctggcgaagctcaagccgtggctggaaagcgccgaacac
aagaaagtcggccagcacatgaagtacgacgagcaggtgctggcgaactacggcatcgaa
atgcgcggcgtcgaacacgacacgctgctggagtcgtacgtgctcgaatcgcaccgcaca
cacgacatggacagcctcgcgctgcgccatctcggcatcaagacgatcaagtacgaagag
gtcgcgggcaagggtgcgtcgcaaatcggcttcgacgaagtcgcgctggacaaggccgcc
gaatacgcggcggaagacgccgatatcaccttgcgtctgcatcaggccttgtatccgcag
gtggccgccgagaaaacgctcgactacgtgtatcgcgatatcgaagtccccacctcgcgt
gtcctgcgcaagatggagcgcaccggtgtgctgatcgacgcggaaaaactgcgcgcgcaa
agcagcgaaatcgccacgcgtctgattcaactggaaagcgaagcgtacgagctggccggc
ggcgaattcaacctgggctcacccaagcagatcggccagatcttcttcgagaagctcgaa
ttgccggtggtcaagaagaccccgagcggcgcgccgtccaccgacgaagaagtgctgcaa
aagctcgctgaagactatccgctgccgaagatcctgctcgaacaccgcggcctgtcgaaa
ctgaaatcgacctacaccgacaaactgccgcgcatggtcaacgccaccaccggccgcgtg
catacgaactatgcgcaggcagtggcggtcaccggccggctggcgtcgaacgatccgaac
ctgcagaacatccccgtgcgcaccgccgaaggccgccgcattcgcgaggcgttcattgcg
ccgccgggtcacaagctcgtttccgccgattattcgcagatcgaattgcgcatcatggcg
cacatttccggcgacgaatcgttgctgcgggcgttctcgcagggcgaagacattcaccgc
gccaccgcggcggaaattttcagcgtgacgccgctcgaagtgtcgagcgatcagcggcgt
gtcgcgaaggtcatcaacttcggcctgatctacggcatgagcgcgttcggtcttgccgcg
aacctcggcattacgcgtgacgcggccaagctgtacatcgaccgctacttcgcgcgttat
ccgggcgtcgcgcggtatatggacgaaacccgtctgagcgcgaagtccaagggctacgtg
gagacggctttcggccgccgcctgtggcttccggagatcaacggcggtaatggtccgcgc
cgtcaggccgcggagcgtgcggctattaacgcgccgatgcagggcaccgccgccgatctg
atcaagctctcgatgatcgcggtgcagaactggatcgaagagtccaaggtcggtacgcgc
atgatcatgcaggtgcacgacgaactgattctcgaagtgccggacgcggaattgtccgat
gtacgtaagcgtttgccggaactgatgtgcggtgtcgccgcgctgaaagtgccgctggtc
gccgaagtgggcgccggtctgaactgggaggaagcgcattga
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