Branchiostoma floridae (Florida lancelet): 118403244
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Entry
118403244 CDS
T01074
Name
(RefSeq) collagen alpha-1(VIII) chain-like
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
Collagen
BclA_C
Dehalogenase
Motif
Other DBs
NCBI-GeneID:
118403244
NCBI-ProteinID:
XP_035657742
UniProt:
A0A9J7KGJ3
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Position
16:complement(11391089..11394215)
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AA seq
315 aa
AA seq
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MLSPFGMSNFAVALFLLSFSVVFYSTSVRGEEGTEDDGACPKNPCEIKVVAAPGPPGPPG
PPGPVGKATDLPRSTVPGPPGPPGPPGPPGPDGMPGFMGPPGARGQPGPKCKPGCIPDML
GPASGPPGPPGLPGRDGIPGRPGHPGVPGVAGPPGAPGLAGPPGLIGPPGYKGPPGDPGS
LGSRLPPVAFFVALSSGTDAVPVLVYDVIHTNVGEAYDRKTGKFVVPTQGVYTFTFTARR
SEAAQNHCTVSLMKNGGKILSVTARAVQSQGSSSAVLLLRPTDEVWVKLTTGYLESDDSG
EAVFSGVLNALVDDD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccccatttggaatgtcaaacttcgccgtcgcgttgtttcttctttccttcagc
gttgttttctactctacttctgtacgcggggaggaaggaacagaagacgacggagcatgt
ccaaagaacccttgtgaaatcaaggtcgttgctgcaccagggcccccaggtcctccgggt
ccgccaggcccagtaggcaaggctacagacttacctaggtccactgtgcctggtccgccg
ggaccaccgggtcccccaggaccaccgggacctgatggaatgccaggcttcatgggccca
cctggggcccgagggcagccaggtccaaaatgcaaaccaggctgcattcccgatatgctt
gggccagcgagtggacctccggggccacctgggctacctggaagagatggaattccgggc
cgccctgggcatccaggtgtacctggtgtcgctgggccacctggagcacccggtttggca
gggccacctggacttataggtcctcctggttacaaaggcccacctggtgatcctggatct
ctggggtcacgtcttccccctgttgcgttcttcgtggcactgagctcgggcactgatgct
gtaccggtgctagtgtacgatgtcatccacaccaacgtgggcgaagcgtacgacaggaag
actggtaaattcgtggtgccgacgcaaggagtgtacacctttacattcacggcaaggagg
agcgaggcagcgcagaaccattgcaccgtctcgctgatgaagaatggaggcaagattctg
tctgtaaccgcacgggccgtgcagagtcagggaagcagcagtgccgtgctactcctgagg
cccacagacgaggtgtgggtgaagctcactaccgggtacctagagagtgatgacagcggg
gaagccgtcttctctggggttctcaatgccttggtggacgatgattag
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