Branchiostoma floridae (Florida lancelet): 118403312
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Entry
118403312 CDS
T01074
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X1
KO
K03258
translation initiation factor 4B
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118403312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118403312
03012 Translation factors [BR:
bfo03012
]
118403312
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118403312
mRNA cycle factors
Stress granule specific factors
118403312
Translation factors [BR:
bfo03012
]
Eukaryotic type
Initiation factors
eIF-4
118403312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
118403312
NCBI-ProteinID:
XP_035657892
UniProt:
A0A9J7KGP1
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All DBs
Position
16:complement(5437240..5455770)
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AA seq
796 aa
AA seq
DB search
MAAAGKKKKKAKGQTVSLNDFLGDAAPTSYVMAPKSNDWADETEGLDYDTTPTWSDSGFS
SAIDRAKLPTAPRSARMADFDASRIPDKPPFTAFLGNLSYDVDEEAIERFFRDMKLVTVR
LPRDGGDSGRLKGFGYAEFEDKDSLLKAINMNNEKLLNRQIRVDVADQTQQGGQDRDSRW
GDRDGKDRSDGRDRALYDELTAGDWRKASSETGILPPARPGGGFSDRRDRDRDRDMDRGG
RSGGGGEEEDRTAGDWRKASAENGPAFGRFGDRDSGQRDIRYSQDQYGDRGPGDDRGGYG
RSDDRGGYGRDRGGYDDRDRGFGSRDRGYNDRGFSDRGRYDDGERSQYGERNRYGDRDRY
GDRDRYGDRGYDRGDRGYDRGGGRRGFGSGYRDDDRRGGGGYDDYGRGGYGRRDDRAGGG
GGYGRDFGDRYGPRRDGDRFGDRDGFRREEREPERGPERGPAERPKLQLAKRTKPVENTP
PPAPAKSSSIFGAAKPVDTAAKEREIEEKLARQKVEEEERYHLERASRAPPRERTESGRS
RRDSENSATSGRSRHNSSSSQTKGPRPVPVSSHQRHDSERSADGNEVFQSDDSPRSPKRE
DAQAKAVPAPPPKDNPWAKRSEPPQGRDEAPTSQPRVGDTPPKYVDAPPPKENAWVRRGP
ASPTSPTSPDGRIPGYARDARDSPSSRGPRRDSGGDRGRGRGSTGRGRVSEDDSDLTTGD
AWGRGGGRGSRGGGPPGSGRPDLRRDDRRQEPRDSKPSRQEPAEPKKYVEPPPPVFSQDS
KFAALLADEDGGEASD
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaggcaagaagaagaagaaggcaaagggacagacagtgagtctgaatgac
ttccttggagacgcagccccgaccagctatgtcatggcacccaagtctaatgactgggct
gatgagactgagggactggactatgacaccaccccaacatggtctgactctgggttctcc
tctgcgattgaccgtgcgaagctccccacggccccgcggtctgcacggatggcagacttc
gacgcctcccggattcccgacaagccgccgttcaccgcattcctcgggaacctctcgtat
gacgtggatgaagaagccatcgagagatttttccgcgatatgaagctagtgacagtgagg
ttacctcgcgacggtggggacagcggtcggctgaagggtttcggatacgcagagtttgag
gacaaggattcacttctcaaagccattaacatgaacaacgagaaactgctgaatcgtcag
atcagggtagatgtggccgaccaaacccaacaagggggacaagatagggattcgagatgg
ggagaccgggacgggaaggaccgctctgacggtcgggacagagcgttgtacgacgagttg
acagcgggagactggagaaaggcgtcatcggaaactgggatcctccctcctgcacgacca
ggaggtggcttttcagatcgaagggatcgcgatcgtgaccgtgacatggaccgaggtggc
cgtagcggtggtggtggcgaggaagaagacagaaccgcaggcgactggaggaaagcttct
gcagagaacggaccagcgttcgggcgctttggggacagagacagtggccaacgtgatatt
cgctatagccaggatcagtatggtgatagaggtcctggcgacgacagaggtggttacggc
agatctgacgaccgtggcggttacggacgagaccgcggcggctacgatgacagagaccga
ggcttcgggtcaagagacagaggctacaacgatcgtggcttcagcgatcgcggcagatac
gatgatggtgagaggtcgcagtatggggagagaaatcgctacggcgaccgggaccggtat
ggagacagggatcgctatggcgaccgaggctatgatagaggagacaggggttatgatagg
ggaggaggtcggcgtggctttggctctggttaccgtgacgacgacagaagaggcggcggt
ggttacgacgactacgggagagggggctacggacgccgggatgaccgcgccggaggcggc
ggggggtacggacgtgactttggcgacaggtacggaccacggagagatggagaccgcttc
ggagaccgtgacggcttcagacgtgaggagagggaaccagaaagaggtcctgaaagaggt
cccgcggaacgacccaaacttcagttggcgaaacgtaccaaacccgtggagaacacccct
cccccggcaccagctaaatctagtagtatattcggcgccgcgaaacccgtggacaccgcg
gctaaggaacgcgagattgaagagaagttggcacgacagaaggtggaagaggaagagagg
taccacctggagcgagcgtctcgagccccacctcgcgagcgtacggaaagcggcagatca
cgacgagacagcgagaactcggcgacgtcgggcaggtcacgacacaacagttcatctagc
caaacaaaaggaccacgtcctgtaccagtgtcgagtcatcaaagacacgacagtgaacga
tccgccgacggcaacgaagtcttccaatcggacgattccccgcggtcaccaaagagagag
gatgcccaagcaaaagccgtccccgctcccccacctaaagacaacccctgggcgaaacgc
agcgagcccccacagggtagggacgaagcaccgaccagccaacccagagttggagacacg
ccgccaaaatatgtagacgctccacctccgaaggaaaatgcctgggtgagaagaggacca
gcttcacccacctcccccacatccccagatggtagaatccctggctatgctagagatgcc
cgggatagtccatcttccaggggtcccaggagggactctggaggagaccggggtagaggc
agaggaagcactggcagaggcagggtctctgaggatgactctgacttaaccacaggtgat
gcctgggggcgcgggggcgggcgtggcagcagagggggcgggccgccggggagcgggaga
ccggacctgagacgagacgaccgcagacaagagccgcgcgacagcaaaccctccaggcaa
gagccagcagagcccaagaaatatgtagaaccaccacctccggttttcagtcaagacagc
aagtttgctgccctgttggctgatgaagacgggggagaggccagcgattga
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