Branchiostoma floridae (Florida lancelet): 118404563
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Entry
118404563 CDS
T01074
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118404563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118404563
03036 Chromosome and associated proteins [BR:
bfo03036
]
118404563
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118404563
Coactivators
SAGA/TFTC/STAGA complex
118404563
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118404563
STAGA complex
118404563
TFTC complex
118404563
SAGA complex
118404563
SLIK complex
118404563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
Ge1_WD40
PROPPIN
WDR54
LisH
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
118404563
NCBI-ProteinID:
XP_035659620
UniProt:
C3ZSP8
LinkDB
All DBs
Position
17:12539914..12551582
Genome browser
AA seq
592 aa
AA seq
DB search
MKRVKSEDIQSAVLQYLKKRQYSDSDTTFKKEQKLSQTVSEMAVQGAVMSESGVSTSFTF
SSCDPDPTLYEDQYSGLKVLIDDAPQAHQSELTVLLYPMFVHLHLDLVCNGHRDAAEAFF
TRHHGNFLVDNMEWYELIEELAGVMCKQDLFTKPKVKAFRETKYAISLSDKAFQYLLRYL
QSDDNLILLRLFNTYLHVNVKPTQNGDLDLYSDKKGGAQEVTMATPPHTPDNKVQPGDVT
QVSLQDCIRRVREGTPYLSSVCLYTFHNTFQGLNTAAVSDDSRFVCGGFDDSTVKVWSGL
SRKLKAAHHTVDVSRINLAGDVLDDKVREDSVGQEVKHMRGHSGPVYGTSFLPNNTFLLT
SSEDTTVRLWNLSTFTNDVIYKGHSYPVWDIDTSPLGAYFVSCSQDRSARLWALDRTFPL
RIFAGHSQDVDCVKFHPNCNYIATGSSDRTVRLWSVQDGKFVRIFHGKDGHKGTIFSLAF
SPDGKHLASAGEDNCVRVWDLTSGDMLKELRAHTDSIYSISYSRDGTMLASAGGDSIVRV
WDMRPNIPDKESDGQPPELLHSYPTKTSSLHMLKFAPSDLLIAAGTAKGDST
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtaaaaagcgaggatatccagtccgctgtgctgcagtatttaaagaaaaga
caatattcggacagtgacacgacctttaagaaggagcagaagttgagtcagacggtgtcg
gagatggcggtgcagggcgcggtcatgtccgagtctggagtcagcacctcattcacattc
agcagctgcgatcctgacccgacactatatgaagaccagtatagcggactcaaagtactc
atagatgatgctccacaagctcaccagtcagagttgacagtcctgctgtatcccatgttt
gtacacctacacttggatttggtctgcaacggacacagggatgctgctgaggcgttcttc
acccgtcaccatggtaacttcctggtagacaacatggagtggtacgagctgatcgaggag
ctggcaggggtcatgtgtaaacaggacctcttcactaaacccaaggtcaaagcctttaga
gagaccaagtatgccataagtctgtcagacaaagccttccaatatctgctgaggtaccta
cagagtgatgacaacctcattttactgagattgttcaacacatacttacatgtgaatgtg
aagccaacacaaaatggtgaccttgacttgtacagcgacaagaagggcggggcgcaggag
gttaccatggcaaccccaccccacacgcccgacaataaggttcagcccggcgacgtgaca
caggtgtcgctacaggattgtatacggcgggtacgggagggaacgccatatctgtcgtcg
gtgtgtctgtacaccttccacaacacattccaagggttaaacacagctgcagtctctgac
gactccaggtttgtgtgtggagggtttgacgactccacagtgaaagtttggagcggcttg
tctcggaaacttaaggcagctcatcacaccgtcgacgtctcaagaattaacctggcggga
gacgtactggacgacaaagtcagagaagacagtgttggtcaggaagtgaaacacatgcgg
ggccacagtggacccgtctacggcacgtctttccttcccaacaacaccttcttactcacc
agctcggaggacactacggtccgcctgtggaacctgtcaaccttcactaacgatgtaata
tacaaagggcacagctatccagtatgggacattgacaccagtccgttgggtgcatacttc
gtgagctgttcccaggacagaagtgcgagactctgggctttagacaggacctttcctctc
aggatatttgctggacactcccaagatgtggattgtgtaaaatttcaccccaactgtaac
tacattgccacgggttcgtctgaccgcacggttcggctctggagtgtccaggacgggaag
tttgtccggatcttccatggaaaagatggacacaaaggaaccatattttccctggcattt
tctcctgatggaaaacacttagcctctgcaggtgaagacaactgtgttcgtgtgtgggac
ctaacgtcaggcgacatgttgaaggaactgcgtgctcacacggacagtatctacagcatc
agctacagccgggacggtaccatgttggcatccgcagggggggacagcatcgtcagggtg
tgggacatgagaccaaacattccagacaaagaatctgatggacaaccaccagagctctta
cacagctaccccaccaaaacctcgtctctgcacatgctgaagtttgccccctcggattta
ctgatagctgcaggcacagccaagggagactccacttaa
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