Branchiostoma floridae (Florida lancelet): 118407736
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Entry
118407736 CDS
T01074
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K21862
voltage-gated cation channel
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfo02000
]
118407736
Transporters [BR:
bfo02000
]
Other transporters
Pores ion channels [TC:
1
]
118407736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
GPHH
Motif
Other DBs
NCBI-GeneID:
118407736
NCBI-ProteinID:
XP_035664149
UniProt:
A0A9J7HQP1
LinkDB
All DBs
Position
2:18602711..18661002
Genome browser
AA seq
1925 aa
AA seq
DB search
MEASSHNPNFKPLSPESLTCIEQRRVEKEQQGKCSKTALNAMVVATTSTTANEAVQEEEL
LAVKDPDLQDGRVLPPSLGPFPEKLTGQPLEDFDPYYQREMTFCVVSKHFSGRRHIHRMS
ASRSLYIFSPFNKLRRIAIYIAVHRFFDIAVMLTIVVNCVFLALTTPIELSEWVFTGIYT
LEMVVKIIARGFILTKFTYLRDPWNWLDFLVVCLAFVTLSVPDLGNLTGIRTFRVLRALK
TISIVPGLKTIVNALLKSMKMLGEVMLLIVFCLTVFALFALQVYLGVLRHKCVQNLPENM
NVTDIQYAEHIQNSTYWYGSDGEYIVCGNASEAAKCPDGYTCLPDIGINPNFGYTGFDDF
GMALLTSLQLITLDYWENVYNLIIEASGPWNMLFFIIVVFFGSFYLINLMLAVVAISYEE
EANYSKKLRRKVRSRQWVSRMAKDGAPAQQTGTASEFTLESGDQTKQNPPLNDAGDSGEI
ETEKPRTSTNDTPMGSKEYPTAVMKLEEGKTVYVPDGDIQEEKGKGEDSNKLGKVDGKIS
SSAVEVEPKVEDGPFNKLSVIEEKVPRSSSPTIRVTEPSPVLYTEPSRFDRLKKGFMDRC
CAWTCCPCWGKFQGVMHVIAMDPLFELFITLCIIVNTAFLTIDHHGMSEDLQNTLTVGNL
VFTGIFGAEALMKMIALGKNYFKDRWNVFDFVVVMVSLLELALVNVKGLSVLRTFRLLRV
FKLARSWPTMKMLLSIIGSSLGALANLTVVLVIIVYILAVLGMQLFGEQYRTFYAGNMPR
YTFVDFFHSFMMIFRVLCGEWIEPLWECMQAAGSGCIPMFLVTLTLGNFMVLNLFLALLL
NSFGADTLSNHEQNQTGNSNKIMAGLNRLRAVLAFKRQKSPKVRPRQDGKEESNSNAESE
GGGKLAVISNGSGPSIEMHAMEEGRNKSPNNIKSITSLSTNQDPPSKKSSPRRLAPLDSR
ALVDEPPITPTQVVQHTERAFQAQREAFSRFEETMYQNHGSSVALDSPRSVSHAGSRAPS
PGARSTSNSPRPKSANSQVSSALVASPKEDNEDKEQEMDEEGKPKVTFEETDKEPEDCFP
ECCIQNCCMRCSCYSRFTTSKHSDLWAAVRKFNFKIVNHKVFEGFILLIIMGSSLCLIFE
DIYLPTKPQLKAVLYYLDITFVVIFTVEMILKWLGVGFKRYFGSVWCWLDFVIVVISLVS
IGAATAGIDNLSAFRALRTLRALRPLRAISRWEGMRVVVNALLQAIPSIFNVLLVCLVFW
LICSIMAVQFFGGQFYKCLDENGEKLDITIVNNRTECLDKNYTWVNSKVNFDHVGQAYLA
LLQVATFEGWIEVMSDAVDVRGVDMQPSFEYTFYAYSYFVFFIIFGSFFTLNLFIGVIID
TFNVLKKKYDGEASIDLFLTETQRKYYNAMRKLGSKKPQKTINRPKNKCQAALFDFVSSK
GFEIGIVILIMLNMVAMAVEHYKQSDTVTYVLALVNIVFTSIFTVEAVLKIIAYRWHYFR
VAWNVFDFIVVLLSILGLILDDLLQNVFITPTLLRVVRVFRIGRVLRLVRAAKGIRKLLF
ALMTSLPALFNIGLLLFLVMFIFAVFGMTSFAYVKKEGALNDMVNFETFGRSLILLFRLT
TSAGWNDVLEPLMNENPPDCDPNFPNGYWKGNCSVAWLAVAYFVSYIILSFLIVINMYIA
VILENFNQAHQQEEDGITEDDFEMFYSVWERYDPYATQFIYYHQLSDFCDNLDEPLRIPK
PNTIKIASLNLPVRAGDRIHCIDVLESLTRRVLGEVEDSEEFSELKAQMQRKFQEAFPQL
TRHEARTTTFMKKQEDRAARVIQRAYRQWVLRKSIRGASQMWRLRNSNSSLNTADQSPAK
LPLTPSRDTVNTKSPFLGVRQRWALDQKTAKRTSFASQSDQHAPDNDSVERKLSTHSLGQ
PDPTT
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtcttcccataacccgaacttcaagccgctttccccagagtctctgacctgc
atcgagcagcggcgagtcgagaaggaacagcaggggaaatgctcgaaaaccgcgctcaac
gccatggtggtggccaccacctccaccacggccaacgaagccgtccaggaggaagagctt
cttgcggtcaaagatcccgacctgcaagacgggcgcgtgctgccgccctccctcggaccc
ttcccggagaagctgacggggcagcccctggaagacttcgatccctactatcagagagaa
atgacgttctgcgtcgtctccaagcacttctccgggaggaggcacatccatcggatgagc
gccagcagatctctctacatcttctcgccattcaacaagctccgccgcatcgccatctac
atagctgtacatagattttttgacattgctgtgatgttgacgattgtagtgaactgcgtg
tttcttgccctgacgaccccgattgaactttcagagtgggtgtttacagggatctacact
ttggagatggttgtcaaaatcatcgcaagaggatttatcctcacgaagttcacctatctc
agagatccttggaattggttggacttcttagtagtatgtttagcgttcgtcaccttgtcg
gtacctgacttaggaaatttgacaggcatcaggaccttcagagttctgagagcactcaaa
accatatcaatagtaccaggattgaaaacaatagtgaatgctctgctcaagtcgatgaag
atgctgggcgaggtcatgctgctaattgtcttctgtttgaccgtcttcgccttgtttgcg
ttgcaagtctatctgggagtcttgagacataagtgtgtacagaacctccccgagaacatg
aacgttacagacatccaatatgcagaacacatacagaatagcacctattggtacggatcg
gacggcgagtacatagtttgcggaaatgcatcagaagcagcgaagtgccctgatggatac
acatgtctaccagacatcggaataaacccgaacttcggctacaccgggtttgacgacttt
ggcatggccctgcttacctcgctgcagctgattacgttagactactgggagaacgtctac
aacctgatcatcgaagccagtggaccctggaacatgctgtttttcatcatagtcgtgttc
tttgggtccttctacctgatcaacctgatgctggcagtggtagccatttcctatgaggaa
gaagcgaactatagcaagaagttgagacggaaggtccgttccagacaatgggtttccagg
atggctaaggacggggcaccggcgcaacaaacagggaccgcatcagagtttaccctcgaa
agtggggatcaaaccaagcagaatcctccgctaaacgatgcgggagactctggagaaatt
gagacggaaaagccacgcacaagcaccaatgacacccctatgggcagtaaagaatatccg
acggccgttatgaaactagaggagggtaagacggtctacgttcccgacggtgatattcag
gaggagaaagggaagggcgaggacagcaacaagcttggcaaagtggacggaaagatctcc
tcttctgcggttgaggtcgaaccaaaggtggaggacggacctttcaacaagttgtcagta
atcgaggaaaaagtgccaagatcatcatctccgaccatccgagttacagaaccatcgcct
gttttatacacggaaccatctcgcttcgatcggctgaagaaaggtttcatggacaggtgc
tgtgcttggacctgctgtccctgttggggcaagttccagggtgtcatgcacgtcatcgcc
atggacccactcttcgaactgttcatcacgctgtgcatcattgtcaacacggctttcctc
accatcgaccaccacggcatgagtgaagatctgcagaacacattgactgtcggcaacctg
gtgtttactggtatcttcggcgcggaagctctcatgaaaatgatcgctcttggcaagaac
tacttcaaggataggtggaacgtcttcgactttgtagtggtgatggtcagccttctggag
ttggcactggtcaacgtcaagggtttgtccgtcctcaggaccttccgattgctgcgagtt
ttcaagctggcacgctcctggccgaccatgaaaatgttgctgtcaatcattggcagctcg
ctaggggcgcttgcaaacttgacagtggtgctcgtcatcattgtgtacattctggctgtg
ctgggcatgcaactctttggagaacagtacaggacattctacgctgggaacatgcctcgc
tacacatttgtggacttcttccactccttcatgatgatattccgcgtgctgtgtggcgag
tggatagagccgctgtgggagtgtatgcaggcggccgggtcaggctgcataccgatgttc
ctcgtcactctcacgttgggaaactttatggttctcaaccttttcctggccctgttgttg
aactctttcggcgccgacacgttgagcaaccacgagcagaaccagacgggaaatagtaac
aagatcatggctgggcttaacaggcttcgggctgttctagctttcaagcggcagaagtca
ccaaaagtccgaccccggcaggacggcaaagaagaaagtaacagcaatgcagaaagcgaa
ggaggtggcaaacttgctgtcataagcaacgggtccggtccgtccatagaaatgcacgct
atggaggagggccggaacaaaagtcctaacaacatcaagagcatcacaagcctgtcaacc
aaccaagatcctcctagcaagaagagttctcccaggcgcctcgctccactggacagcagg
gcattagtggacgagccacctattactccaacgcaggttgttcaacatacggagcgtgct
ttccaggcccagcgagaagccttcagcaggtttgaggaaacgatgtaccagaaccacggc
agcagtgtcgcactcgactccccccgcagcgtcagccacgccgggtcccgagcccccagc
cctggggcccgatcaacctccaacagccctcgaccaaaatcggccaactcccaggtgtca
tctgcactggtggcatctccaaaagaagacaatgaggataaagagcaagagatggacgaa
gagggaaaaccgaaggtgaccttcgaggagacagacaaagagccagaagactgcttcccg
gaatgctgcatccagaactgctgtatgcgttgctcgtgttacagcaggttcacgaccagc
aagcacagtgatctgtgggccgctgtacggaagttcaacttcaagattgtcaaccacaag
gtcttcgaagggtttatccttctcatcatcatgggcagcagtctctgtctgatctttgag
gacatctacttgccgaccaagccacaactgaaagcggtactgtactacttggacatcacg
tttgtcgtcatcttcacagtagagatgatactgaaatggctgggtgtcggcttcaaacga
tacttcggtagcgtctggtgctggcttgacttcgtcattgttgtgatctcgctggtcagc
atcggagcagccactgccggtatcgacaacctctcggctttccgagcactgcggaccctc
cgagcactgcgacccttacgggccatctcacgatgggagggtatgcgggttgtggtgaac
gctctccttcaagcgatcccgtccatcttcaacgtgttactggtgtgccttgtgttctgg
ctcatctgcagcatcatggcggtgcagttcttcggaggccagttctacaagtgtctggat
gaaaacggagagaaactagacatcactattgtgaacaacaggactgagtgtctagataag
aactacacctgggtgaacagcaaagttaactttgatcatgttggccaagcctatctcgca
ctacttcaagtggcaacgtttgaaggctggatagaggttatgtcagacgctgttgacgtt
cgcggggtggacatgcagccatcgttcgaatacaccttttatgcgtacagctatttcgtc
ttcttcatcatcttcggctctttcttcaccttgaacctcttcattggtgttatcatcgac
accttcaatgtactgaagaaaaagtatgacggagaagcgtccattgatctcttcctcacc
gagacccagaggaagtactacaacgcgatgcggaaactgggatcgaagaaaccccagaaa
acaatcaacagaccaaagaacaaatgccaggcggcattgttcgatttcgtgtcgagtaaa
ggctttgagattggtatcgtcatactgatcatgttgaacatggtggccatggccgtggag
cactacaagcaaagcgacacggtcacgtacgtcctggcactcgtcaacatcgtcttcacc
tccatcttcaccgtggaggccgtgctgaagatcatcgcctaccgatggcactacttcagg
gttgcctggaacgtcttcgacttcatcgtggtccttttgtctatcctgggtctaatattg
gatgacttgctgcagaacgtattcatcacaccaaccctcctgagggtggtgcgagtcttc
agaatagggcgagtcttacgtctggtcagggcagccaaagggatcaggaagttgctcttc
gcactgatgacgtcacttccggccctcttcaacatcggactcctcctgttcctcgtgatg
ttcatatttgccgtctttggaatgacgtcatttgcatacgtgaagaaggaaggggccctc
aacgacatggtcaactttgaaactttcggaaggagtttgatccttctgttccggctgact
acttcagcggggtggaacgacgtgctggaacctctcatgaacgaaaatcctccagactgt
gatccgaactttccgaatggatactggaaaggaaattgtagcgtagcgtggttagcagta
gcgtatttcgtgtcatacatcatcctgagttttcttattgtgatcaacatgtacatagcg
gtgatcctggagaactttaaccaggctcaccagcaggaggaagacgggatcacagaggat
gactttgagatgttttactctgtgtgggaaagatacgatccttatgccacacagtttatc
tactaccatcaactgtcggacttctgcgacaatctagacgagccgttacgaattccaaaa
ccgaacaccataaagattgcttcgctaaatcttccagtacgcgcgggagacaggatacac
tgtatcgatgtgctggaatccctaacgcggcgtgttctaggagaggtggaagacagcgag
gagttttcggaactcaaggcacagatgcaaaggaagttccaagaagcgttcccgcagctc
acgcgccatgaagccagaaccacgaccttcatgaaaaagcaggaagacagagctgcccga
gtcatccaaagagcgtacagacaatgggtccttcgaaagtccattcgaggtgcatctcag
atgtggcgtctgcgcaacagtaacagcagcctcaacaccgccgatcagtcccctgcaaaa
ctgcccctgacaccatcacgtgacactgtgaacaccaaatctccgtttctcggtgtcaga
cagcgttgggccttggaccagaagacagctaaaagaacttcttttgcctctcagtcagac
cagcatgctccagacaatgacagtgtggagcggaagttgagcacacacagcttgggccaa
ccagacccaaccacgtga
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