Branchiostoma floridae (Florida lancelet): 118410341
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Entry
118410341 CDS
T01074
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
118410341
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118410341
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
RWD
HA2_N
zf-CCCH_4
Torus
nSTAND3
zf-CCCH
Exportin-5
zf_CCCH_4
NB-ARC
ATPase
PhoH
T2SSE
zf-CCCH_2
UBA
Motif
Other DBs
NCBI-GeneID:
118410341
NCBI-ProteinID:
XP_035667918
UniProt:
A0A9J7KPR9
LinkDB
All DBs
Position
1:complement(16454801..16475128)
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AA seq
1406 aa
AA seq
DB search
MSEGVKRRGGKPNRGGGRFNKPTSGRGGGRGRGGRGGGSRGGGGKKSFYMTLGLIQYITY
PELFVCRGRGRPSLAGGGGEGRKAGASAVAEGYLGDATFTDLDYDVDDGFDFRQQHQSAG
PKAGGAPSSYGRGGSSTSGVSRGYRGGHGRGHHGRKVQIQRLHMTNENQDMVRDMLKSLQ
GADLDEVDPEEYDELDVRMEDQYWLTDSRIAVQELTSYSGTAQVNVLDEVGQTRLEINRM
ALHRLQRYGFHVDRCVKALQANKGDVGASMEFLYNQCLTEDGIRVSENKELEDLPSMDEA
LEQRRDEAVALESIYDETFKERISDKLWVLHLDLPHIKPILEVLEEQKEEGKRPKYKLTE
RSKDSEKKSEDICKFYLKGNCRFGRRCRHSHVKPEEERPKHLIQDQEDEASSQSPYEVEI
RFPAQCLYPYQPPIVAFTSNRIDFPTAACLNISLRLNQEAQSLAESHSPAVFSLVSVLED
EDEMWKLILGKPHRFSLQEPVISARGASKGLSTGNVTPPSVEDEESSDLPEGSSSEEETN
GEDVKTAVVRSNKFVRPVKDLHVVRSENRKLKDRFKKKQTTSAYRSMLGERKKLPAWNEQ
DNILKALKDNQVLVVSGMTGCGKTTQVPQFILDDYLGSSKGGLCNIICTQPRRISATAVA
DRVANERVERLGNVVGYQIRLESKMVNTVFLFLNDFLIMVLKDLLPKRPDIRVILMSATL
NADLFSMYFGNSPVIEIPGKIFPVDQYFLEDAIDFTRYVVEENSPYARLLKPGGGASKMK
VSSRREFFEDVTEQLKNLEVSGVKPPKDSTPDQNLNLQEMFYRYKDLHKSVVKTLATMDF
EKINNDLMEALLEWIVMGDHQYPKDGAVLVFLPGLAEITSLYEQLQSSSVFGSRSKRKFN
IIPLHSSLSSEDQQKVFYKPKEGTTKIVLSTNIAETSITIDDVVFVIDAGRMKEKRYDHT
KGMESLEVTWVSKANALQRKGRAGRVASGVCFHLFTSHSFDHIFREQQVPEIQRAPLEQL
LLRIKILDIFKDQELQHVLSRTLEPPKPTNIETAIARLQDLGALNRDQELTPLGYHLAQL
PVDVRIGKLMLFGAIFRCLDPVLTIAASLSFRSPFVAPFDKRDEADKKKQEFAIGNSDHL
TLLNAYKGWTTSLKHGSYAGYRYSMENFLSIKTLKEIVSMKRQFTELLSSIGFVKEGLTA
RLIERSSNSNDPDGIITAAGEETNLNANNQQLVAAMMCAALYPNVVQVLTPESKYSLTSA
GAVPKAPKPEELRFKTRDDGYVFVHPSSVNFQVRHYESPYLVYHEKVKTSKIYIRDCSMV
SVYPLLLFGGGNLRIDLEAGNFVISLDDGWIRFIAASHEVAELVRELRLELDQLLADKIE
NPNMDLCNCPRGSRIIDTIVKLITTQ
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggggtgaaacgcagaggtggaaagcccaaccgtggcggaggaagatttaac
aagcctacgtctggacgaggtggggggcgaggaagagggggcagaggtggagggagcaga
ggtggagggggtaagaaaagtttttacatgacacttggcttaattcaatacatcacttat
ccagaattgtttgtttgtcgaggcagagggagaccaagcttagctgggggtggaggtgaa
ggcaggaaggcaggggcatcagctgtggctgagggctacttgggagatgcaaccttcact
gacctggattatgatgttgatgatggctttgattttagacaacaacatcaatctgctggg
cccaaagccggaggagcaccctcctcttatgggcgtggaggaagttccacatctggtgtt
tcccgtggatacaggggtggccatggccgtggtcatcatgggaggaaagtacagattcaa
cgactgcacatgaccaatgaaaatcaggacatggtgcgagacatgctcaagagcctgcaa
ggtgcagaccttgatgaagttgacccagaggagtatgatgagttggatgtacgtatggaa
gaccagtactggctgacagactccaggattgctgtgcaggagttgacatcttactcaggg
actgcacaagtgaatgtactggatgaggtggggcagactaggctggagatcaacagaatg
gctcttcatagactacagagatatggatttcatgtggacagatgtgtcaaggccctgcaa
gcaaacaaaggagacgtaggtgcttccatggagtttctctacaaccagtgccttacagaa
gatggcattagagtctcagagaacaaagagttagaagacctgcccagcatggatgaggct
ttggaacaaagaagggatgaggccgtggctcttgaatctatctatgatgaaacctttaaa
gaaaggatctctgacaagctctgggtcctacatctggaccttccacatattaaacctatt
ttagaagtcctagaagaacagaaggaggagggaaaaagaccaaaatataagttaactgag
aggagcaaagattctgaaaagaagagtgaagacatctgtaaattctatctgaagggtaac
tgtagatttggtcgaaggtgtcggcatagtcatgtcaagcctgaagaagagagacctaaa
cacctcatacaggatcaagaggatgaggccagtagccagagcccttatgaagtagaaata
cgctttccagctcaatgtctatatccctaccaacccccaatagttgctttcacctctaat
agaattgacttcccaacagcagcatgtttgaacatttccctcaggctcaaccaggaagca
caatcattggctgaaagtcactctcctgctgtgttctcattggtcagtgttttggaagat
gaagatgaaatgtggaaactgatactggggaagcctcataggttcagtttacaagagcca
gtcatctcagccaggggagccagtaagggattaagtactggcaatgtgacgcctccatct
gtggaggatgaagagagcagtgaccttcctgaggggtcatcttctgaagaggagacaaat
ggagaggacgtcaagacagctgtcgttaggagcaacaaattcgtgagacctgttaaggac
ttgcatgttgtgaggagtgagaacagaaaactcaaagacaggttcaagaaaaaacagaca
acatcagcatacaggtccatgttaggggagaggaagaagttaccagcatggaatgaacaa
gacaacattctaaaggccctgaaagacaaccaagtcttggttgtcagtggcatgactgga
tgtgggaagaccactcaagttccccagttcatcctggatgattacctgggctccagtaaa
ggcggcctgtgcaacatcatctgcacacagccccgcaggatctcagctacagctgtggct
gacagggtggcgaacgagagggtggaacggctgggtaatgtggtggggtaccagatcagg
ctggagagcaaaatggtaaatactgtcttcttgttcctgaatgacttcctgatcatggta
ctgaaggacctgctgcccaagcgccctgacatccgtgtcatactcatgagtgccaccctt
aatgctgacttgttctccatgtactttggcaacagtcctgttatagagataccaggaaaa
atatttccagtagaccagtactttcttgaagatgcaattgacttcacaaggtatgtggtg
gaggaaaactccccatatgcacgccttttgaagcccggtggtggagcatccaagatgaag
gtgtctagcaggagggagttcttcgaggatgtcaccgagcagctgaagaacctggaagtt
tccggtgtgaaacctcccaaggacagcacacctgatcagaacctgaacctgcaggagatg
ttctacagatacaaagacctacataagtcagttgtgaagactctggccaccatggatttt
gagaagatcaacaacgatctgatggaggctttactggagtggattgtgatgggagatcat
cagtaccccaaggatggagcagtgctggtgttcctgcctggtctggcagagataacctca
ctgtacgagcagctgcagagcagctctgtctttggctccaggagcaaaaggaagttcaac
atcatcccactccactcatcactttcgagtgaagaccagcagaaagtcttctacaaaccc
aaggaggggacgaccaagattgtgctgtccactaacattgctgaaacatccatcactatt
gatgacgtggtgtttgttattgatgctggcaggatgaaggagaaaaggtatgaccacacc
aaaggcatggagagccttgaggtgacgtgggtatccaaggccaatgcgctacagaggaag
ggccgggcaggccgtgtggcctcgggggtgtgcttccatctcttcacctcccacagcttt
gaccacatcttcagggagcagcaggtgccagagatccaaagagcacctctggagcagctg
ttacttaggattaaaattctggacatcttcaaagatcaagaactgcagcatgttctatct
aggaccctggagccacccaagcccacgaacattgagactgccattgccaggttacaggat
ctaggagctctgaatagggaccaggagctgacacctctcgggtaccacctggcccagtta
ccagtagatgtcaggataggaaagctgatgttatttggagccattttccggtgcttagat
cctgtcctcacaatagctgccagtctaagcttcaggtcacccttcgtggcaccttttgac
aagcgggatgaggctgacaagaagaagcaagagtttgcaataggaaacagtgaccatctc
actctactcaatgcatacaagggttggaccacttctctcaaacatggctcatatgctggc
tacagatattccatggaaaactttttgtctataaagacccttaaggagattgtcagcatg
aagcgacagttcacagagctgctgtccagtatcggctttgtgaaggagggactgaccgcc
agactgatagagaggtccagcaacagtaatgaccctgatgggatcatcactgcagcagga
gaggagacaaacctgaatgcaaacaaccaacagctggtagcagctatgatgtgtgcagct
ctgtacccaaatgttgtacaggtgctgacaccagagtccaagtacagcctcaccagtgca
ggggctgttccaaaagcaccgaaaccagaggaactcaggttcaagaccagagatgatgga
tatgtgtttgttcatccatcttctgtcaacttccaagtgagacactatgagagcccctac
ctggtttaccatgagaaagtaaaaacttcgaagatctacatccgtgactgcagcatggtg
tctgtctatcccctgctgctgtttggtggggggaacctgcgcattgacctggaggctggc
aattttgtcatctccttggatgatggctggatcaggttcatagctgcttctcatgaggtg
gctgagttggtccgtgagctacgactggagctggatcagctgctggcagacaagattgag
aaccccaacatggacctctgtaactgtcccaggggaagccgcatcattgacaccatagtt
aaactcattaccacacagtaa
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integrated database retrieval system
