Branchiostoma floridae (Florida lancelet): 118410780
Help
Entry
118410780 CDS
T01074
Name
(RefSeq) scaffold attachment factor B2-like isoform X1
KO
K25093
SAFB-like transcription modulator
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118410780
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
Other domain-containing proteins
RRM domain-containing proteins
118410780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
118410780
NCBI-ProteinID:
XP_035668475
UniProt:
A0A9J7KQR7
LinkDB
All DBs
Position
3:complement(2379306..2394786)
Genome browser
AA seq
1267 aa
AA seq
DB search
MAIEKKKLSELRVVDLREELEKRGLEKGGTKPVLIERLKKAIQDEGGDPNEIEVEAGEKP
ASAKKAAGARRTPVRRIKKEEQEASTEPAEDGMETEAADVPDSLSLKDEPMDDLDVLDEE
DSIDQQEMDTIDDLGEDDLEPEETSTVNGEDEVPPEEVPADAVSMETGDAPETVTTPTDG
EEGKGEVSEESAEVPSSETADVAAESTAAPPDTAAAGEGQVPEGATAQDSQEATETEMDA
ASLVDKVLNETEETADDVALSAEQEEELLTEDEVGEGEAEPPAEEKDKEGSNNKKAPKEE
PAKPAGAKVIAPGDAPVPFPLTTKDLLEMHAPTASKDEEENISLVVHADDQMIADLDADL
LDTPKDAESSVEGAPAAEESGKEQEKVEETTKEAADLPEGEGAKKEAEEGKGSEEGKKAA
EAGGEKSKENSAKKSPSVSARTRRLVCLCASGKDAKDTKAPQNKDEKARHSSSSSSSKNL
WVSGLSSTTRATDLKAAFSKYGKVVGAKVVTNARSPGARCYGFVTMSSSEEAARCITHLH
RTELHGRMISVERAKNDPSSSSKKPPEKKEPEKRDLRSSSTRKPSADTRKPAPKKEDKDK
KEAEKKPEDKKDEKEEKKDEEKRSSSQTRRSTGDKAAPAAKDKEAGEKEGTDKDGKEGTR
TVVMDKKKGEPVVTVKDGKRDSKSKEKDGQQPRKGSKEKQGEILSFDKIKEQRERERQRQ
RERELREMERRRADRERRERERQREIIQREREERERLQRERERLQRERERLEREKQERER
LERERMRIERERAREQERIAREREETRRLQLQLEEERRQLKRALEAPRERDSYWSEPKRQ
YEGDFHRNAPETNRFNDYDNRDRGPGYTRDVDHRSAAPPPDPYERRVERYDRRDNTQRRD
DQPPSRYNDNSRDVPPRRDDLPPPRRDEPARRDEPRRDIRDRDNRRTPTVPSRRTPPGPR
DRGARPDRGHAPEPDRMPRGTRVPPRERPAERPDRSRSPHRRSSPRPTREEWKSERSLPS
ERRDGRARVAGSAAMRGGMDPISKGMSNPTSSMSYGGREPAPVGMQSHDSRFPLDDRRPR
EPGPPRDDWGPVPSDDRSRAAAPRASASSYNDRQISSVGDNRPGLLGSAPSRGGDSRDWS
SGDRMRKAEPQRQPGTDGHGWPMGGLENPTVNRLGERWPGSMGQQQVESRGGARGVLAVS
AGTMSQHQRTAGGYISAAPQHHAQPPPATQLLSRAPAVGGFGGPDRHKPAQDNRFDPYSR
APPARRY
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgagaagaaaaaactcagcgagcttcgagtcgtcgatttgagggaagaactt
gagaaaagaggcctcgaaaagggaggaacaaagcccgtactgatagagagattaaagaag
gctatccaagatgagggaggagatcctaatgagattgaggttgaggctggggagaagcct
gcgtcagctaagaaggcagcaggagccagaagaacacctgtccgccgcattaagaaagaa
gaacaagaagcgagcacagagccggctgaagatggaatggagacggaggcggctgacgtt
cccgacagcctgtcactgaaggatgaacctatggatgatctggatgtccttgacgaggaa
gactccatagatcagcaggagatggatacgatcgacgaccttggagaggacgaccttgag
ccagaggaaacctccactgtgaacggggaggatgaggtccctccagaggaggttcctgca
gatgcggtttctatggaaactggcgacgccccggagactgttaccacgccgacagatgga
gaggaagggaagggggaagtttctgaagagagtgcagaggttccgagttctgaaaccgct
gacgtggcggccgaatccaccgcagcaccaccggacacggcagccgcaggggaagggcag
gtgccagaaggcgccactgcacaggacagccaggaggccacagaaacggagatggatgct
gcgagcctggtggacaaggttctaaacgaaacggaagagaccgcggacgatgtcgccctg
tcagcagaacaggaagaagaacttcttactgaggatgaggttggagagggcgaggcagaa
ccccccgcagaggagaaagacaaagaaggtagcaacaacaagaaagcacccaaggaggag
ccagccaagcctgccggggcaaaggtcatcgccccgggagatgcccccgttccgttcccc
ttgacgaccaaggacctgcttgagatgcacgcgccgacggcctccaaggacgaagaagag
aacatctcgctggtggttcacgccgacgaccagatgatcgctgaccttgacgccgacctc
ctggacacgcccaaggacgcggagtcttctgtggaaggtgctcccgctgccgaggagtca
ggcaaggagcaggaaaaggttgaagagacgactaaggaggctgccgacctcccggaagga
gagggcgccaagaaggaggctgaggaggggaaagggagcgaggaagggaagaaagctgcg
gaggcaggtggagagaagagcaaagaaaactcggccaagaaaagcccgagtgttagcgcg
aggactcggaggttggtctgcttgtgcgccagtggtaaagatgcaaaggacacgaaagca
ccgcagaacaaggatgagaaggcgcgccacagcagctccagctccagcagtaagaacctc
tgggtaagcggcctctcctcaacaactcgcgccaccgacctgaaggctgccttcagcaag
tatggcaaggtggtgggggcaaaggtggtgaccaacgcacgcagcccaggtgcccgttgt
tacggctttgtgaccatgtcgtccagtgaagaagctgcgcgatgcatcacccacctccac
cgtactgagctgcacgggcgaatgatctcagtggagagggctaagaacgacccctccagc
tcctccaagaagcctcctgagaagaaggagccagagaaaagagacctccgctccagctcc
acccggaaaccatctgccgacacccggaaaccagcacccaagaaggaggacaaggacaag
aaggaggcagagaagaagcctgaagacaagaaagatgagaaggaggagaagaaggatgag
gagaagcgctcatcgtctcagacccgccgcagtaccggggacaaagctgctccagcagca
aaggacaaagaggctggtgagaaggaaggaacagacaaggacgggaaggaaggaactcgc
actgttgtcatggacaagaagaagggggagcctgtggtaacagtgaaagacggtaaacgg
gactctaagtcgaaggaaaaggatggccagcagcctcgcaaaggcagcaaggagaagcag
ggggagatcctgtcgttcgataagatcaaggagcagcgagagcgtgaacggcagcgtcag
cgtgaacgagagctgcgagaaatggagcgccgccgcgctgacagggagagacgagagcgt
gagcgacagagggagatcatccagcgtgagcgggaggaacgggagcgactccagcgagag
cgggagcgacttcagagagagagggagcgactggagcgggagaagcaggaacgagagcgg
ttggagagggaacggatgcggattgagcgtgagcgtgcccgtgagcaggagaggatcgct
cgtgagcgggaggagacgcggcggctccagcttcagcttgaggaggagcgcaggcagctg
aagcgggcgctcgaggcccctcgtgagagggactcttactggagcgaaccaaagagacaa
tatgagggtgacttccaccgtaacgcaccagaaacaaaccgctttaatgactacgataac
cgtgaccgtggcccaggctacacacgtgatgttgaccaccgttcagctgcccctcctcct
gacccgtacgaacgccgagtcgaacggtatgatcgccgtgacaacacacaacgcagagac
gaccagcccccgtcccgctacaatgacaactcgcgagatgtccctccgaggcgagatgac
ctgcctcctccccgccgtgatgagccagcccggcgggatgagcctcggcgagacatccgt
gaccgtgacaaccgcagaaccccaaccgttcccagccgccgcacgccaccgggaccgcgg
gatagaggtgcccgtcctgaccggggtcacgcccctgaaccagaccggatgccacgcggc
acccgggtcccacctagagagcgcccagcagaacgccctgaccggtcccgcagcccacac
cgccgtagcagtccccggccgacccgggaagagtggaagtcagagaggagcctaccgagc
gagaggcgtgacgggcgagcccgtgttgcgggcagtgccgccatgcgaggaggtatggat
cccatctctaaaggtatgagtaatcccactagcagtatgtcgtatgggggaagggagcca
gctccagtaggaatgcaaagtcacgactcccgttttcccctagatgatcgccgcccccga
gagccaggcccaccgcgagacgactggggtccagtcccgtctgacgacaggagccgggca
gcggcaccacgagcatcagcatcctcctacaatgaccggcagatctcgagtgtgggtgac
aaccggcctgggctgttaggcagtgccccatcccgagggggtgactcccgcgactggagc
agtggggaccggatgcggaaggcagagcctcagcgccagccggggacggatggacacggc
tggccgatgggcgggctggagaacccgacagtgaaccggctgggggagcggtggccgggg
tccatggggcagcagcaggtggagtcccgaggtggtgcgcggggagtcctggccgtcagc
gcgggaacgatgtcgcagcaccagcggacagcgggaggttacatcagtgccgcacctcag
caccatgcacagccgcccccggcaacccagctcctcagcagagcgccagccgtcggaggc
tttggcgggcctgacaggcacaagcctgcacaggacaacaggtttgacccctacagtagg
gcgccaccagcccgcaggtactag
DBGET
integrated database retrieval system
