Branchiostoma floridae (Florida lancelet): 118411536
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Entry
118411536 CDS
T01074
Name
(RefSeq) collagen alpha-1(III) chain-like
KO
K24742
WD repeat-containing protein 25
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118411536
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
WD40 repeat (WDR) domain-containing proteins
Other WDR domain-containing proteins
118411536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
118411536
NCBI-ProteinID:
XP_035669755
UniProt:
A0A9J7MJN8
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All DBs
Position
1:14744976..14751439
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AA seq
1337 aa
AA seq
DB search
MNALVQYESSSSDEEEGRPPSAARQAKAAKRGSSKSGGKKAKVASAEVTQSTNVQAQNPA
GYSNDWQAMGYSQQGYGQTWPQGYDYSQYAQAYGQWGDYQQWANYYAGYGQQQQYGTQAA
MQPPAVPPQTSSVTQSTTTGSSTSDVTPQPPPPSGPPSEKPPLPTGAPPAPSTTGQQPEE
NSPASQTQTTSATSSSVDSQVSTAGQVQAGSQDTSSGQANMDPNMMWNNMWNYQQYDPQA
WSQYYAGQGYQDPNMAMGQWGQWGQQWQNWQQQQQQQGTPEQTGQQKEQQTQQQGGFQTT
PQAATGNTEQKPPPQGPPPQGPPPQGPPPHGPPPGLNGQDHWQSPDWHQSWHPGQMGQRP
PGPMDHGPRMRMRHMGPMDHGPRPRHRGPMDGPRHRHPPPMGQGPRMRHPMEHGPRGPRG
PMDHGQRPRHHGPMDQRPRHPGGMDQRPRHRHPGPMDFGQRPRHPGGMDQQPRHPPLMEK
GQQPRFPGSADQGPRPMERPRNPGAVDQGPRPRFPGPMDQSQRPRHPGPMGPRGRAPDIG
EGKDTRWSGQPWQRDNRGPKDQDDQQEDQESEQPQKKEEPATEEKQKPALSLAERLKMIA
ESKAPQTGSASSHLASRPTPAEKDKKKGSDEKGNANYVPLGFNKLQQMSRGNQGSDNGRE
GRGPRGERGGRGDRGGQGGRGGRDDRGGRRSRFGQDDEPRGSSWGRDRNQPSYRSGREGR
PDREGRDRDSRSDRDGRSSRFSHDSRDRQGDSQQERRGSRFSGGPPSHGEQSKPGGEGNV
RSNIDGKQSRWETPRSTGTDDPQKQPKTRTKWGAETTDGQESLSKALLPDPAGQPGGGGN
HQGNPPSLFDIQVQPSSHLQQGQGQGGQQQLRQRGEQESNPPGPRASPSVGPRGPSPTGF
RGPSPTGLRGPTPPGPRGSPSPGPRGLPPPQFQGHNQGNWSQQNFGSPEGQGSGMKRVSS
NDSQFSPSDGGPGIHPYTPKRARLEPDGSPSNPSPTGMVLQDTTMAAVQDIFEPYPKIVF
ALGKALQSRIPEKRLVDLQGHTGPVNTVEWCKADCSHLLLSSSMDRTVRVWDAIGDAKCV
RTLTNHRAGVKMAAWTSDKKVLSCSFDKTAQLTDPQTGQTVSTFPHSNFVTVVRVHPQEH
NLFLTGSTDIIQAWDSRTGKAVRDFKCKFGSVLDLAFLSDGKSFVSSADVVARDSADKTI
MVWDFSSAAKLSNQIFHERYSCPSLAVHPSKPNFIAQTNGDYIALFSTSRPYAMDKTVRF
EGHKVQGYRIGCEFTPDGQMIVTGSGDGKVHYFNFYSGESARELNVYTNPCTDVKSHPVL
SSTLATCSWSGQVSVWQ
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctcgtacagtatgagagctcaagttcagacgaggaggaggggcggccacct
tccgcggcaagacaagcaaaagctgcaaaacgaggttcctccaagtctggcgggaagaag
gccaaagtggcgtcagcagaggtcacacagagcaccaatgtccaagctcagaacccagca
ggatattccaatgattggcaggcaatgggttattcccaacaaggctatgggcagacttgg
ccgcaaggctatgactacagtcaatatgcacaggcttatggacaatggggagactatcaa
cagtgggctaactactatgccgggtacggacaacagcaacagtacggtacacaggcagcc
atgcagcctcccgcagtcccaccacaaaccagttcagtcacacaatctacgactactgga
tcatcaacctcagatgtaacaccccagccccctccaccctcaggacccccctcagagaaa
ccccccctaccaacaggtgcaccaccagcaccctccaccacaggtcaacaaccggaggaa
aatagtccagcgtctcagacgcaaaccacctctgcaacatcgtctagtgtggattctcag
gttagtacggccgggcaggtgcaggctggctcgcaggacaccagctctggccaggcaaac
atggaccccaacatgatgtggaacaacatgtggaactaccaacagtatgatccacaggca
tggagccagtattatgcagggcaggggtatcaggaccctaacatggcaatgggtcagtgg
ggccaatggggccaacagtggcagaactggcagcagcagcaacagcagcaaggtactcct
gaacagactggacaacagaaggaacagcaaacccagcaacaaggaggctttcagactacg
cctcaagctgcaactggcaacacagaacaaaagccgcctcctcaggggccaccccctcag
ggtcccccaccacaaggaccaccaccacatggccctccacccggactgaatggtcaggat
cattggcagagtccagattggcatcagtcctggcacccaggccaaatgggccaacgacca
cctggccccatggaccatgggccaaggatgaggatgaggcacatgggcccaatggatcat
ggaccccgcccacgtcaccgtggccccatggatggcccaaggcatcgccaccccccacca
atgggccagggacctcggatgaggcatccaatggaacatggacctcggggtcctcgtggg
cccatggatcatgggcaaaggccaagacatcatggacccatggaccaaagaccacgacat
cctggcggaatggatcaaagaccacggcacaggcatccaggtccgatggattttggacag
cggccacggcatcctggaggtatggaccagcaaccccgacatcccccattgatggaaaaa
ggacagcagccacggtttccaggttcagcagatcaaggcccccggcccatggagcggcca
cggaatcctggtgcagtggatcagggaccaagaccaaggttccctggaccaatggatcaa
agccagaggccacggcaccctggcccaatgggtccgaggggaagagctcctgatataggg
gaagggaaagacacaaggtggagtggacagccttggcagagagataatcgtggtcccaaa
gatcaggatgatcaacaggaagatcaggagtcagaacaacctcaaaagaaggaagagcca
gctactgaggagaaacaaaaacctgcacttagcttggcagagaggctcaagatgattgct
gagtccaaggctccacaaactggttctgcatctagtcacctagcttcaaggcccacacca
gcagagaaggacaaaaagaaaggttctgatgaaaagggaaatgcaaactatgtaccttta
ggatttaacaaactgcagcagatgtcacgaggaaatcagggcagtgataatggcagggaa
ggaagaggaccaagaggtgaacgtggaggtcggggggacaggggtggacaaggtggcaga
ggagggagggatgaccgagggggaaggaggagcaggtttggacaagacgatgagccaagg
gggtcatcttggggacgagacagaaaccagccatcatacaggtctggcagagagggcagg
ccggacagggaaggaagagatcgagacagcaggtcagacagagatggtcgatccagcagg
ttcagccatgactccagggacagacagggtgacagccagcaggagagaagagggagtagg
ttctctggtgggccaccttcacacggggagcagagcaaacctggtggggagggaaatgtg
aggtcaaacatagatggaaagcaaagtcgctgggagacccctcgtagcactgggacagat
gaccctcagaaacaacccaaaaccaggacaaaatggggagcagaaaccacggatggccag
gagagcctttccaaagcactgctcccagatcccgcaggccaaccaggaggaggaggcaat
caccagggcaatcctccatcactatttgacatccaagttcaaccttcatcccatctccag
caaggtcagggccaaggtggccagcagcagttgagacagagaggagaacaggagtctaat
cctcccggtccaagagcatccccatctgtaggtccaaggggaccttctcccactggcttt
aggggaccatctcctacagggctaagaggacctactccccctggaccaaggggttcccct
tcccctggaccaagaggtctaccgccccctcagtttcagggacacaaccaagggaactgg
tcacagcagaactttgggtcccctgagggacagggcagtggaatgaagagagtgtcctca
aatgactcccaattctctccttctgatggaggaccaggcatccatccctacacgcccaaa
cgtgccagactagagccagatgggtcgcctagcaaccccagccccaccggcatggtgcta
caagacaccaccatggctgcagtacaggatatatttgaaccataccccaaaattgtgttt
gccctggggaaagctttgcaaagcaggattcctgagaaaagacttgttgatctgcaaggc
cacacgggtcccgtgaacactgtggagtggtgcaaggccgactgtagccatcttctcctg
tcttcctccatggacaggactgtcagagtctgggatgccattggagatgccaagtgtgtc
cgaactctgaccaatcacagggcaggagtgaagatggctgcgtggacttcagacaagaaa
gtgctgagctgcagctttgacaagactgctcagctcaccgatccacagacaggtcaaact
gtgtcaacattcccccattccaattttgtgactgttgttcgagtccatccccaggaacat
aacctgttcctgactgggtccacagacatcattcaggcttgggacagcaggacaggcaag
gctgttcgggattttaaatgcaagtttggttccgttctggacttggccttcctgtctgac
gggaaatcatttgtcagcagcgctgatgttgtggcaagagactccgccgacaagacgatc
atggtgtgggacttcagctctgcagccaagctgtccaaccagatatttcatgagcgatat
agctgcccttctctggctgtccatccctcaaagccaaacttcattgcccagactaatgga
gactacattgccctcttctccacatctcgcccatatgccatggacaagactgtccgtttt
gaaggacacaaggttcaggggtatcggatcggctgcgagtttaccccagatggacagatg
atcgtgactggtagcggtgacgggaaggtgcactacttcaacttctactcgggggagagt
gcacgtgagctgaacgtgtacacaaacccgtgcacagatgtgaagtcccaccctgtcctg
agcagcaccctggctacctgcagctggagtggacaggtctctgtctggcagtaa
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