Branchiostoma floridae (Florida lancelet): 118413219
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Entry
118413219 CDS
T01074
Name
(RefSeq) U1 small nuclear ribonucleoprotein C isoform X1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118413219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118413219
Spliceosome [BR:
bfo03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
118413219
Complex B
118413219
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
Motif
Other DBs
NCBI-GeneID:
118413219
NCBI-ProteinID:
XP_035672337
UniProt:
A0A9J7KXL8
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All DBs
Position
4:complement(3762247..3772968)
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AA seq
247 aa
AA seq
DB search
MPKYFCDYCDTYLTHDSPSVRKTHCNGRKHKENVRVYYQKWMEEQAQQLIDQTTAAFQAG
KIPNNPFPNAAGQVGNEPGAKVLPPAILQAAAFQAGKIASNPFPTSQAGPGPQGGGTMIP
PPPSLQGPGGPGSAPAPPRMPGPLLMTPPPGAAAPGMAPPGAPIWLVRHKTGMIAKPEAL
PQPARGPILLVPAGAVRPQMSVGAVMGPRLCKHSYHINKALFLIKIHTLQKATQSQLVVY
KTVEKSK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagtacttctgtgactactgtgacacatacctcacacacgactcaccgtcggtg
agaaaaacccactgcaatggcagaaagcacaaggagaatgtgagagtgtactaccagaaa
tggatggaggaacaggcacagcagctcatcgaccagacaacggctgccttccaggcgggg
aaaatcccaaacaaccctttccctaacgccgccgggcaggtgggcaacgaaccaggggct
aaggttctgcccccggctattctgcaagccgctgcattccaggcgggcaagatcgccagc
aaccccttccccaccagccaggccggaccagggccccagggagggggcaccatgatcccc
ccaccccccagccttcagggccctgggggcccgggtagcgcgcctgccccgccccgcatg
cccgggccgctactcatgacgccaccgccgggagctgccgcaccgggaatggcgccacct
ggcgctccaatttggcttgtgcgtcacaagactggaatgattgcaaaacccgaagccttg
cctcagcctgccagaggacccattttattggtgccagccggagccgtcagacctcagatg
tcggtaggagcggtcatggggcccagattatgtaagcattcctaccatattaacaaggcc
cttttcttaattaaaattcataccctacaaaaggccactcaaagtcaactagttgtttat
aagactgttgaaaaatctaaataa
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