Branchiostoma floridae (Florida lancelet): 118413824
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Entry
118413824 CDS
T01074
Name
(RefSeq) collagen alpha-1(XVII) chain-like isoform X1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Spc29
FapA
DUF641
MAD
CENP-F_leu_zip
HMMR_N
Golgin_A5
MPS2
ATG14
HIP1_clath_bdg
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
118413824
NCBI-ProteinID:
XP_035673271
UniProt:
A0A9J7KZR9
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Position
4:complement(7947394..7962979)
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AA seq
487 aa
AA seq
DB search
MSSEKLLNVSEVTGRARRDRPGAARPVTVAVAAGAGVLVVAALVFLAHEVKHVRENSAQL
KDQILTLKDRTLAMEIKQDAATGNKEEASCHKEEMTALKIQLSSVQTQLDSERAEVSSLK
AELQKEKADGASLRERLAVLETKFQLGHAEEQNFGNFREGEKSNQADSVPEHNATLRRYR
RSPNSVTPYGPFRCPEGPAGRDGRDGRDGVPGPPGPPCGCGGCGEPSCEQGPPGPEGPPG
PEGPPGPEGPPGPEGSPGAQGSLGAQGPPGPEGSLGAQGPPGPEGSPGAQGPPGPEGSPG
TQGSPGPEGSPGAEGSPGAQGSPGPEGSPGPEGSPGAQGSPGAQGSPGAQGSPGLDGPPG
PPGVNGSSTDYVNYRDVLAQSICTAASNQASDIFAIRRDCRPNYGDGLTCNDMCTSRKAA
MIAAVGSRRSTSECFDAVYVYGNRPVLSSDHNTDAGELGPAAYRYLSGGCAFAANVCGPN
YCCCRLR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagaagctgcttaacgtaagcgaagttaccggccgggcccgccgagaccga
cccggcgcggcccgaccggtgacggtggccgtggctgccggggcgggggtgctggtggtg
gcggccctcgtcttcctcgctcacgaagttaagcatgtccgtgagaactccgctcaactg
aaagaccagatcctgacgctgaaggatcgcaccttggccatggagatcaagcaagacgcc
gctactggaaacaaggaagaggcgtcctgtcacaaggaggaaatgacggccttgaaaatc
caactgtcgtctgtgcagactcaattagacagcgaacgtgctgaggtctcgtctctcaag
gcggagttgcagaaggagaaagctgacggggcgtctctgagggagagactggctgtgctg
gaaaccaagttccaactcgggcatgctgaggaacaaaactttggaaactttcgagagggc
gagaagtccaaccaagctgacagtgtccctgaacacaacgctaccttgcggaggtacagg
cgatcccccaactccgtcacaccgtacggtcccttccgctgtcccgaaggaccggccgga
cgagacgggcgggacggccgtgatggtgttcccgggccgcccgggcctccgtgcggatgt
ggagggtgtggggagccgtcttgcgaacagggtccacctggaccagagggcccgcctgga
ccagagggcccgcctggaccagagggcccgcctggaccagagggctcgcctggagcacag
ggctctcttggtgcacagggaccgcctggaccagagggctctcttggtgcacagggaccg
cctggaccagagggctcgcctggtgcacagggaccgcctggaccagagggctcgcccgga
acacagggctcgcctggaccagagggctcgcctggagcagagggctcgcctggtgcacag
ggctcgcctggaccagagggctcgcctggaccagagggctcgcctggagcacagggctcg
cctggagcacagggctcgcctggagcacagggctcgcctggactagatggcccgcctgga
ccacctggagtaaatggatcaagcacagactacgtcaactaccgtgacgtactggcacag
agcatctgcacagcggcctccaaccaagcatcagacatcttcgccatccgtcgggattgc
agacctaattacggggacggtctgacgtgcaacgacatgtgcacatctcgcaaagcggcc
atgatagcagctgtcggcagccggaggagcacctcagagtgctttgatgccgtatatgtg
tacgggaatcggccagtcctttcatccgaccacaatactgacgctggagaactcggccct
gcagcatatcgctatctcagcggtggctgtgcttttgcggctaacgtctgcgggccaaac
tactgttgctgtcgccttcgctag
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