Branchiostoma floridae (Florida lancelet): 118417623
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Entry
118417623 CDS
T01074
Name
(RefSeq) RNA-binding protein 12-like
KO
K24526
RNA-binding protein 12
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118417623
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118417623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Trs65
Motif
Other DBs
NCBI-GeneID:
118417623
NCBI-ProteinID:
XP_035679127
UniProt:
A0A9J7MSB3
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Position
6:complement(1759962..1765458)
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AA seq
875 aa
AA seq
DB search
MAVVIRLQGLPWSASAMDIRSFFSGLTIPDGGVHIVGGDAGDAFIIFASDEDARQAMART
GNTIHGSPITLYLSSRKEMQDRINMSRSTTFDSPAPVATGNVEKTQSPAFGSRNVAPNGS
SYAPPPVQESSYSSMSSSSYNSSQFSAAQTCIQLFGLNTNVTVSEIHSLFSGLEIASDGI
VIEMDPFGNKTGKAFVKFKSVRDCSAAVRTYKEYLAARHIEVMSCTESQWQIAYDFAKAV
QTPAVSYANTNTGMMQRMQPQPRQTQPPPQHSRSPVMPRSGAQQNRAQGTQRPRSRSPID
RTDSMCISLKGLPYTAKDKDVRDFFKGLGIRKVWIDFEDGKAIGSGFVEFKSYGDQKAAL
RMHKKYMGSRYIEVTSAPSTDMQKHIQKFRETRKAQNEKKKAEAAKKAAAEAEVRKADDA
RKMEENKRAEENRRAESRRAEEARKAADAEARTKREAEAKKAAEARKAAASATVSAPVPT
PSPLKRQASSEPISEPSPAKKQAVEPTPSVSHPPKSEEKAKPEKVSPEAAAEVKVESKAD
EKTPAKGAKAAEDQSSKAGPEKEKAKHEAGQSDPKAEEKEKASKKPDTKPKKGSKSPGKE
AKTTKELDPRAKCCMHVWNLPYKASKREIENFFTGSTIAERGIHMVYTKTGEFSGEVFVE
FVSISDCDRAYKLRAKRLGGRMALLRPISREEMRDRMARPTQRDMRTSDKDRDRRQQDRM
MPQDQMQDPPRRGPQGPQIPSLLDLPSNAPLGRNVGMPPFQPQMGVQQGPGLVPGGNMNM
PNVGGPPAPAFNTNEPLSDIVGIQNLPMTATMEEILDFFYGYPVLKDSVHIHRSDRGDPT
GNASVAFPTPQDAMIATRELNGRPMGVKKLRLLLI
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtaatccgactccagggtctgccatggtcggcctccgccatggacattcga
tccttcttctcgggcctcaccattcccgacggaggggtgcatatcgtgggtggggacgcg
ggggacgccttcataatctttgcctcggacgaggacgcccgccaggcgatggcccgcaca
gggaacacgatccacggctcgcccatcaccctgtacctcagctcccgcaaggagatgcag
gaccgcatcaacatgagccggagcaccaccttcgactcccccgctcccgtcgctactggc
aacgtggagaagacacagtctcccgcttttggttcccgcaacgtggccccgaacggctcg
tcttatgcccctcctccggtacaggagagcagctacagcagcatgtcctcctcgagctat
aactcctctcagtttagcgcagcacagacgtgcattcagctgttcggcctcaacaccaac
gtcacagtgtcggagatccactctctcttctctgggttggagatcgccagcgatggcatt
gtcattgagatggacccttttggtaacaaaacgggcaaggccttcgtcaagttcaagtct
gtccgcgactgttcggccgctgtgcgtacttacaaggagtatctggccgcccgtcacatt
gaggtcatgtcttgcacagagagccagtggcagatagcttacgactttgctaaggccgtc
cagaccccggccgtcagctacgccaacactaacactgggatgatgcagaggatgcagcca
cagcctcgtcagacccagccccctccccaacactcccgttctcccgtcatgccgagatca
ggagcccagcaaaaccgggcgcaaggtacccagcggcctcgttctcgttcccccattgat
cgcactgactcgatgtgtataagtctgaaaggtctcccttacaccgcaaaggacaaggat
gtccgtgacttcttcaaaggcctgggcatcagaaaggtctggattgactttgaggatggt
aaggctatcggcagtgggtttgttgagttcaagtcctatggtgatcagaaggcagccctc
agaatgcataagaaatacatgggaagccggtacatcgaagtcaccagtgcaccatccacc
gacatgcagaagcatattcagaagttccgtgagaccagaaaggcgcagaatgagaagaag
aaggctgaagcagcgaagaaagcagctgccgaagctgaagtcaggaaggctgatgatgcc
agaaagatggaggaaaacaagcgggctgaggagaacagaagggccgagtctcgacgggca
gaagaggccaggaaggctgctgatgcagaagccagaacgaagagagaagcagaggccaag
aaagctgctgaagcaaggaaagcagcggcttcagcaacagtgtctgcgccagtgcccact
ccttcccctctcaagcgccaggcttcgtcagaaccgatctccgagccctcgccggcaaag
aaacaagcagtggagccaactccctcagtctcgcatcctcccaagagcgaagagaaagca
aagccagaaaaagtgtcacccgaagcagctgctgaggtgaaggttgagtcaaaggctgac
gagaaaactccagcaaagggggcaaaggcagcagaagatcaatcgagtaaggcagggcca
gaaaaggagaaggctaaacatgaagccgggcaatctgatcccaaagctgaagaaaaggag
aaagcttccaagaagccagacaccaagcccaagaagggttcaaagtcccctggaaaggag
gctaaaactaccaaggagcttgatcccagggcaaagtgctgcatgcatgtttggaacctt
ccttacaaagcgagtaaacgggagattgaaaacttcttcacgggcagcaccattgctgag
aggggtattcacatggtgtataccaagacgggagagttctcgggcgaggtctttgttgag
tttgttagcatttcggactgtgacagggcttacaagcttcgagcaaagcgcctaggcggt
cgaatggcccttcttcgacccatctcacgggaagagatgagggaccgcatggcacggcct
acacaacgcgacatgcgtacctcggataaggatagggataggcggcagcaagaccgcatg
atgcctcaagaccagatgcaggatccccctcgcagggggccacaaggccctcagatccca
agcttgctggacctgccctccaatgccccacttggcaggaatgtcggcatgcctccgttc
cagccccaaatgggggtgcaacagggccctgggttagtcccagggggtaacatgaacatg
ccgaacgtaggcggcccccctgcccccgcattcaacaccaacgaacccctgagcgacatt
gtcggcatccaaaacctccccatgacagccactatggaggaaatcctggacttcttctat
ggctaccctgtcctgaaagactctgtccacattcacaggtctgaccgtggggatcccacg
ggtaatgcgtcagtggctttccccaccccccaggacgccatgattgcaacgcgagagttg
aatggccggccgatgggcgtcaagaagctgcgtctcctcctcatctag
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