Branchiostoma floridae (Florida lancelet): 118425327
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Entry
118425327 CDS
T01074
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Chordopox_A33R
UL45
Motif
Other DBs
NCBI-GeneID:
118425327
NCBI-ProteinID:
XP_035690028
UniProt:
A0A9J7LVS9
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Position
11:complement(19225319..19238216)
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AA seq
446 aa
AA seq
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MPTGPPREGSEMRPLGSVSVIPYGVKVATGPSGPPGEKGPMGPPVPGFTAPSGEKGATGS
PGEMGSFGPAGPPGEKGPMGPPGPGFAGPPGEKGAIGPAGPPGEKGPMGPSGPPGEKEAI
GPAGPPGEKGPMGPPGPGFVAPPGEKGPMGPPGPGFPGPPGEKGPTGEKGAMGPPGKKGA
MGPPGREMVGPPGEKGAMGPPGERGVMGCPGEKGAIGPPGRKGAIGPPGRKGATGPTGSA
GPPARCPSGYNMFQQTCYKMFSTPKKFNQAASACNEDGGTLAMPQDAGTNTFLVSLQAKK
VYWIGLHDQRKEGRFQWMDGSDIGKYNSWYPKQPDNVYGIEDCVLSFDGKWYDMECRNRM
LFSCEVAPNSTYISDHVPFIKSQVIQIQCAKLNRNDGWELPKSYLPLIRKEAGEGGLEGG
GLGDPRKSRAWSRDLVRLGYSVIKTY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgggcctcccagagaagggagtgaaatgcggccacttggctccgtatctgtc
attccttatggagtaaaggtagccactgggccatctggccctccaggagaaaagggaccc
atggggcctcccgttcctgggtttactgctccttccggagaaaagggagccactggttct
cccggagaaatgggatcctttgggccagctggtcctcccggagaaaagggacccatgggg
cctcccggtcctgggtttgctggtcctcccggagaaaagggagcaattgggccagctggt
cctcccggagaaaagggacccatggggccatctggtcctcctggagaaaaggaagccatt
gggccagctggtcctcccggagaaaagggacccatggggcctcccggtcctgggtttgtt
gctcctcccggagaaaagggacccatggggcctcccggtcctgggtttcctggtcctcca
ggagaaaagggacccactggagaaaagggagccatggggcctccagggaaaaagggagcc
atggggccacccggaagagagatggtcgggccgcccggagaaaagggagccatgggtcct
cccggagaaaggggagtcatggggtgtccaggagaaaagggagccattgggcctcccggt
cgaaagggagcaatcgggccaccaggtcgaaagggagccacagggccaactggatccgct
ggtccaccagcacgttgcccgagtggttataacatgtttcaacaaacctgctacaagatg
ttcagcacaccaaagaaattcaaccaagctgcctcggcctgtaatgaagacggcggaacc
ctcgccatgccccaagacgctgggaccaacaccttcctggtctccctacaggctaagaag
gtctactggatcggcctgcatgaccagcgcaaagaaggcagatttcagtggatggatggc
tctgatattggaaagtacaattcgtggtatccgaaacagccagataacgtgtatggtatt
gaagattgcgttctcagctttgatggaaaatggtacgacatggagtgccgaaacaggatg
ctattcagttgtgaagttgctccaaatagcacatatatcagcgaccatgtcccattcatc
aagtcccaggtcatacagatccaatgcgccaaactgaaccgcaatgatggctgggagctg
cccaagtcctacctccccctaatccgtaaggaggccggggaagggggattggaaggtggg
gggttgggtgatccacgcaaatctcgggcctggtctcgtgatctcgtgagacttggctat
tctgtgatcaagacgtactga
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