Branchiostoma floridae (Florida lancelet): 118426699
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Entry
118426699 CDS
T01074
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
bfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118426699
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118426699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118426699
04121 Ubiquitin system [BR:
bfo04121
]
118426699
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118426699
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118426699
Spliceosome [BR:
bfo03041
]
Complex B
Other components
Prp19 complex
118426699
Complex C
Prp19-CDC5 complex
118426699
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
U-box type E3
118426699
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
118426699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
PROPPIN
eIF2A
Nup160
Ge1_WD40
zf-Nse
ATG16
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
118426699
NCBI-ProteinID:
XP_035692121
UniProt:
C3YVN0
LinkDB
All DBs
Position
11:591092..603119
Genome browser
AA seq
511 aa
AA seq
DB search
MALICSISNEVPEHPVVSPISGHVFERRLIEKFVSENGTDPMNGEPLSSDQLVEIKVQPT
VKPRPPSATSIPAILKALQDEWDACMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIAVPAPSVPAVAQPAAAAEPMEMAAEPGEEGMTEEIIQKLQ
DKAAVLTADRKKRGKKVPEELMPAENLSNFKQQASHPGLHSASIPGILSMDIHTADTSKI
LTGGADKNAVVFDKESEQVVCILKGHRQKVNNVLYHPSENLVFTASPDSTIRVWGVPSGQ
CSNIIQAHDGAVTGISLHATGDFLLSASEDQFWAFSDVRTGRVLTKVTDESSKTSLTCAQ
FHPDGLIFGTGTDDSQVKIWDLKERTNVANFPGHSGPITAIAFSENGYYLATAADDSMVK
LWDLRKLKNFKTISLDERYEDRYEIKSLCFDQSGTYLAVAGSDIRVYLCKQWQELVVMKE
HTAPVTSIKFGNHAAFLASTSMDRSLKIYGL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatctgttcaatttccaatgaagtcccggagcacccagtggtctcacccatc
tccggacatgtgtttgagcggcggctgattgagaagttcgtgtcggagaatggaacagac
ccaatgaatggagagcctctcagttctgaccaactggtagagataaaagtgcaacccaca
gtgaagccgcgcccaccgtcagccaccagtatcccagccattctgaaggccttacaagat
gagtgggatgcctgcatgctgcacagtttcacactcaggcagcaactgcagactactcgc
caagagttgtctcacgccctgtaccagcatgatgcagcatgtcgtgtgatcgcacgcctg
actaaagaggtgacggcagcgcgtgaggccctggcaaccctgaagccccaggctgggatc
gctgtccccgccccttcagtccccgcagtggcgcagcctgcagctgcagcagaacccatg
gagatggctgcagaacccggggaggaaggcatgactgaagagatcatacagaagctgcaa
gacaaggcagcagtgctgactgcagacaggaagaagcgtggtaagaaggtaccagaagaa
ctgatgccagcagaaaacttgtccaacttcaagcaacaggcatcacatccgggtctgcac
agtgccagtatcccagggatcctctctatggacatccacactgcagacacctccaagatt
ctcacaggtggtgccgacaaaaatgccgtcgtgtttgacaaagagagcgaacaggtggtc
tgcatcctcaagggtcaccgacagaaggttaacaatgtgctgtaccatccttcagagaac
ctggtgttcacagcatcaccagactcaaccattcgagtatggggggtgcctagtggacag
tgcagtaacatcatccaggcacatgatggcgctgttaccggcatctcacttcatgccaca
ggagacttccttctgtcagcctcagaggaccagttctgggcgttctcagacgtgcggaca
ggtcgtgtgctgactaaggtcactgatgagtccagtaagacatcgctgacttgtgcccag
tttcaccctgatggcctgatcttcggcacggggacagacgacagtcaggtcaagatctgg
gacctgaaggagagaactaacgtcgccaactttccaggacactctggtcccatcactgcc
attgccttttctgagaacggctactacctggctactgctgcagatgactccatggttaag
ctctgggatctgaggaaactgaaaaacttcaagactatttcactggatgagcgttatgag
gacagatacgagatcaagtccctgtgttttgaccagagtggtacctacttggctgtggca
ggcagtgatatcagggtgtatctgtgtaagcagtggcaggagctggtggtgatgaaggaa
cacacggcaccggtcacctccatcaagtttgggaaccacgcagccttcctggcctccacc
agcatggaccgctccctcaagatctatgggctatag
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