Branchiostoma floridae (Florida lancelet): 118427208
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Entry
118427208 CDS
T01074
Name
(RefSeq) eukaryotic initiation factor 4A-I-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427208
03012 Translation factors [BR:
bfo03012
]
118427208
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118427208
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118427208
mRNA cycle factors
Stress granule specific factors
118427208
Translation factors [BR:
bfo03012
]
Eukaryotic type
Initiation factors
eIF-4
118427208
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118427208
Exosomal proteins of bladder cancer cells
118427208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-GeneID:
118427208
NCBI-ProteinID:
XP_035692737
UniProt:
A0A9J7M189
LinkDB
All DBs
Position
12:15563332..15576095
Genome browser
AA seq
545 aa
AA seq
DB search
MSDYAQTEQGSEPRPTDNDTEVPHEELHAKRVGWGPQDMGPRERRDLSPRDLRDLGPREY
EPREVGPPEERRDLDPREARDLSPRGPRDLGPPGDYEPRNLGPREYEEEEDEYYRRSRRP
DDGSWGPSDQNGPEGGETMHQHTHHSEDGPAGMDPEGLIETNWDEVVDNFDDMGLREDLL
RGIYAYGFEKPSAIQQRAILPCCQGRDVIAQAQSGTGKTATFAVAILQQLAMKAGNAGRN
CQALVLAPTRELAQQIQKVVLALGDYMNARCHACIGGTNVRSDIAALEEGVHIVVGTPGR
VNDMIGRRALNTSDVKLFVLDEADEMLSRGFKDQIYDIFKFLPSDIQVILLSATMPSDVL
EVTTKFMRNPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFCNT
RRKVDWLTEKMSGRDFTVSAMHGDMDQRERDLIMREFRSGSSRVLITTDLLARGIDVQQV
SLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFMTMEDCRCLKDIEQYYNTQVEEMPMN
VADLI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactacgctcagactgaacaggggtctgaacccagacctacagataatgacaca
gaggtaccacatgaggaactccatgccaaaagggttggctggggcccccaagacatgggg
cctcgagagcggagagatctaagtccgcgggatcttcgcgatcttgggcccagggagtat
gaaccccgcgaagtagggccgcccgaagaacgcagagatctggaccctagggaagccaga
gatcttagtcccaggggaccgcgggatctaggcccgcctggcgactacgagcctcgcaat
ctcgggcccagggagtacgaggaagaagaagacgagtattaccgcagatcgagaaggccc
gatgacgggtcgtggggaccttctgaccagaatggcccagagggaggcgagaccatgcac
cagcacactcaccactctgaggatgggcccgctggtatggaccctgagggactcatcgag
accaactgggacgaggtagttgataattttgatgacatgggtcttcgtgaggacctacta
agaggcatctatgcctatggctttgagaagccctctgctatccagcagcgagccattttg
ccttgctgccaaggccgtgacgtgattgcgcaggcccagtccggtacgggaaagacggcc
acgttcgctgttgccatcctccaacagctggccatgaaggcaggaaatgccgggagaaac
tgccaagccctggtgctggcacccactcgtgagctggcacaacagatccagaaggtagtg
ctggcccttggcgactacatgaacgcccgctgccacgcctgtatcggaggcaccaatgtg
cgctcggacatcgcagccctggaggagggcgtccacatcgtggtgggcacgcccggccgc
gtgaacgacatgattggcaggagagctctcaacacctcggatgtgaagctgtttgtgctt
gacgaggctgatgagatgctgtctcgtggtttcaaggaccagatctacgacatcttcaaa
tttctgccatctgacattcaggtgatccttctgtctgccaccatgcccagcgacgtgctg
gaggtcacgaccaagttcatgcgcaaccccatccgcatcctggtcaagaaggaggaactg
accctggagggtatcaagcagttttacatcaatgtggaacgtgaggaatggaagctggac
accctgtgtgacttgtacgagaccctcaccatcacccaagctgtcatcttctgcaacacg
cggcggaaagtggactggctgactgagaagatgtctggccgggacttcacggtctccgcc
atgcacggcgacatggaccagcgcgagcgcgacctgatcatgcgagagttccgctcggga
tccagccgtgtcctcatcactactgacctgctggcccgtggtatcgacgtgcagcaggtt
tcccttgtcatcaactatgacttgccaacaaacagagaaaactatattcacaggattgga
cgaggtggtcgttttggtcgcaagggagtggccatcaactttatgacaatggaggattgt
cgttgtctgaaggacattgagcagtactacaatacccaggttgaggagatgcccatgaac
gtggctgatctgatctaa
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