Branchiostoma floridae (Florida lancelet): 118432075
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Entry
118432075 CDS
T01074
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118432075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118432075
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
118432075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
118432075
NCBI-ProteinID:
XP_035699479
UniProt:
C3YQI6
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All DBs
Position
15:complement(14576415..14588384)
Genome browser
AA seq
534 aa
AA seq
DB search
MSAQPSGSGSLQGGLQGPEEFTVKIQKNPQKKYNVMRFAANSAVDMSAWKEANMERETST
MDIYKDESMPEYGEGSEYGRKWREEARQKKYGINKTKLKLEDQPWLLKVGGKGGKRFVGR
KEGGINEASSYFVFRQTGNKTFEACPVESWYNFTPQIKYRYLNEEEAEAEFEKRHKVLNY
FNIMMKKRLENKDEAETEGETEKNVSARDDLRVREGDDSDSDLGGFSDDSDNEAEGKKEK
AKTAKKKKDTKVQKKKKKKQKGSDDEALEDSDEGDYDGREVDYMSDEDESASEEEVDKSK
ADGTDLKGVDQEMEMSSSEEEEEGEGEKEGEAAEGEKTAEDKPDKKEESDSSSSEDSDVD
LESSALFMQDKKEGKLHGKGGKGRSKKGKTAFGKASSKGNSKSGSSSSSRASTPAPDGGI
GSTLAAAAKKLEQQKGTKRAGEGDSPLPKKARHSRSHDGSGSGTPTSELGLTEESVRRYL
MRKPMTAKDLLKKFPTGKTGLNRDQTVAKVTEILKKLNPEKKTINGKIHLWLKS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacagccatcaggcagtggtagtctgcaaggaggtcttcaaggtccagaggaa
ttcacagtcaaaatacagaagaatccccaaaagaaatacaatgtgatgagatttgctgcc
aacagtgctgtggacatgtctgcatggaaggaggccaacatggagagagaaaccagtacc
atggacatatacaaagacgagtcgatgccggaatacggcgagggtagtgagtacgggcgg
aaatggcgtgaggaggcgcgacagaagaaatacggcatcaacaagacaaaactcaagctg
gaagaccagccgtggttacttaaagtaggaggaaaaggtggcaaaagatttgtagggaga
aaggagggaggaatcaacgaggcctcgtcgtacttcgtcttcagacagacgggaaacaag
acgttcgaggcctgccctgtggagtcctggtacaacttcacaccccagatcaagtacaga
tacctgaatgaggaagaagctgaggccgaatttgagaagagacataaagttctgaactat
ttcaacatcatgatgaagaaaagactggagaataaggatgaggcagaaacggagggagaa
acagagaagaacgtatcggccagagatgacttgagggtgcgagaaggggatgattctgac
tctgacttaggtggcttctctgatgactcagataatgaggcagaggggaagaaagaaaag
gcaaaaactgccaagaaaaagaaggataccaaagtccagaagaaaaagaagaagaaacaa
aaaggttctgatgatgaggcactagaagacagtgatgagggagactatgatggcagagaa
gtggactacatgtcagatgaagatgaaagtgcttcagaagaagaagtagacaagtccaaa
gctgatggtacagacctgaagggtgtggatcaggagatggagatgtcctctagtgaggag
gaggaggagggggagggggagaaggaaggggaggctgctgagggggagaaaacagcagaa
gacaaacctgacaaaaaagaagagagtgacagcagctcgtcagaagacagtgatgttgac
cttgaatcctctgcactcttcatgcaggacaagaaagaagggaaactgcatggaaaaggc
ggcaaggggcgaagtaaaaaggggaagactgcttttgggaaggccagttctaaaggtaac
tccaagtccggcagtagcagcagtagtagagccagtacacctgcgccggacggaggcatc
gggtcaacgctagccgcagccgccaagaagttagaacaacagaaaggtaccaagcgagca
ggtgagggagacagtccgctgcctaagaaggctcgccacagtcgcagccatgatgggtca
gggtccggcacaccaacaagtgagcttggtctaacagaggagtcggtgagaagatatctt
atgaggaaacccatgacagctaaggaccttcttaagaagttccccacgggtaagacgggg
ttgaaccgtgaccaaaccgtggcaaaggtcaccgagatactcaagaaactcaacccggag
aagaaaacgataaacggaaagatccatctttggctgaagtcctga
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