Bacteroides fragilis NCTC 9343: BF9343_0779
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Entry
BF9343_0779 CDS
T00239
Name
(GenBank) putative alanine racemase and UDP-N-acetylmuramoylalanyl-D-glutamyl, 6-diaminopimelate-D-alanyl-D-alanyl ligase fusion protein
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs00300
Lysine biosynthesis
bfs00470
D-Amino acid metabolism
bfs00550
Peptidoglycan biosynthesis
bfs01100
Metabolic pathways
bfs01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BF9343_0779
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BF9343_0779
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BF9343_0779
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BF9343_0779
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfs01011
]
BF9343_0779
Enzymes [BR:
bfs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
BF9343_0779
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BF9343_0779
Peptidoglycan biosynthesis and degradation proteins [BR:
bfs01011
]
Precursor biosynthesis
Amino acid ligase
BF9343_0779
Racemase
BF9343_0779
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
CAH06560
UniProt:
Q5LH26
LinkDB
All DBs
Position
complement(1008069..1010591)
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AA seq
840 aa
AA seq
DB search
MQICQCFNIMSYTIESIVEKIGARRLGNKPAAIDWLLTDSRSLCFPEETLFFAIPTKRNN
GARYIPDLYERGVRNFVVTSEDFKGLTMDSEQLKVTMAQECNFLIVPNTLKALQKLAEQH
RGSFQIPVVGITGSNGKTIVKEWLHQLLSPDRVIVRSPRSYNSQIGVPLSVWQMNEESEL
GIFEAGISEMGEMRPLQNMIKPTIGILTNIGGAHQENFFSLQEKCMEKLSLFKDCDVVIY
NGDNEMISNCVGKSMLTAREIAWSMRDIERPLYISRVEKKEDHTVISYRYLEMDNTFCIP
FIDDASIENSLNCLAACLYLMVPADQITERMARLEPVAMRLEVKDGKNNCILINDSYNSD
LASLDIALDFLYRRSQSKGLKRTLILSDILETGQSTTTLYRKVAQLVHSRGIEKIIGVGA
EISSCASKFDIEKYFFPDTKALLASDVIKKLRNEIILIKGSRNFGFDLVSEELELKVHET
ILEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVAD
EGSDLRKAGITASIIIMDPELTAFKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPIH
VKLDTGMHRLGFEEKDIPQLIRRLKNQNALIPRSVFSHFVGSDSAQFDAFTRQQIERYEK
MSKELQDAFPHKILRHICNTAGIERFPGAQFDMVRLGIGLYGISPIDNSIINNVSTLKTT
ILQIRDVAEEDTVGYSRKGHLIRPSRIAAIPIGYADGLNRHLGCGHGYCLVNGKKAPYVG
NICMDVCMIDVTDIDCREGDQAIIFGDELPITVLSDALETIPYEVLTGISTRVKRVYYQD
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaatatgccaatgctttaatattatgtcatatacaattgaatcaatcgttgaaaaa
ataggtgcacggcgtctgggaaacaagcctgctgccatcgactggctactgactgacagc
cgttcgttatgttttccggaagagaccctcttttttgccattcccaccaaaaggaacaac
ggcgcacgctacatccctgacctttatgaacggggagtgcgcaattttgtagtcacaagc
gaagatttcaaagggctcaccatggacagtgagcaactaaaagtgacaatggctcaggaa
tgcaatttccttattgtccccaatactttaaaagcacttcagaaattggccgaacaacac
cgtggttccttccagattccggtagtcggcattacgggcagcaatggaaagaccattgta
aaagaatggcttcaccaattgctcagccccgaccgggttatcgtgcgttcaccgcgcagc
tacaattcgcaaatcggtgtcccgctgtcagtctggcaaatgaacgaggaatccgaactg
ggcattttcgaagccggcatttcggaaatgggcgaaatgcgtccgttacagaatatgatt
aagccgacaataggcatcctgaccaacattggcggagcacatcaggaaaacttcttttca
ctgcaagagaagtgcatggaaaaactaagcctgtttaaagattgcgacgtagtcatttac
aatggcgacaacgaaatgataagcaactgcgtaggaaagtcaatgctgactgcccgtgaa
atcgcatggagcatgagggatatcgaacgtccgctctatatcagcagggttgagaagaaa
gaagatcataccgtcatctcctaccgctatctggagatggacaatacattctgtattccc
tttatcgatgatgcttccatagagaactcactgaactgcctcgctgcctgcctgtacctg
atggtaccggccgaccagatcaccgaacgaatggcccggctcgaacctgtagcgatgcgc
cttgaagtaaaagacggaaagaacaactgtatcttgatcaatgacagttataattcggac
cttgcttcgctggatatcgctctcgactttctttaccggcgttcgcagtcaaaaggccta
aagcgcactttgatcctttcggatatcctggaaaccggacaaagcacgacaacactctac
cgcaaagtggcacaactggttcacagccgcggcattgaaaagattatcggtgtaggtgcc
gaaatatcctcatgcgcatcaaagtttgatatagaaaaatatttcttccccgataccaag
gcacttctggcatcagatgtaattaagaaactcagaaatgaaatcatcctgataaaaggc
tcccgcaacttcggtttcgacctcgtttcggaagaactggaactgaaagtacacgaaacc
atcctggaagtaaacctgggagctatggtagccaacctgaatcactaccgctcgatgctc
aaaccggaaactaaaatggtgtgcatggtgaaagcgtctgcttatggagcaggttcgtac
gaaatagccaaaacccttcaggagcatcacgctgactatctggcagtggccgtagccgat
gaaggttccgaccttcgcaaagcagggatcacagcctccattatcatcatggatcccgaa
ctgaccgctttcaaaaccatgttcgactataaactggaaccggaagtatacaatttccat
ttactcgacgcattgataaaagccgccgaaaaagaaggtatcaccaacttccccattcac
gtaaaactggatacgggtatgcaccgattgggattcgaagagaaagacatcccgcaactg
attcgccggttaaagaaccagaatgcactgattccccgctctgtcttttcccatttcgta
ggcagtgattctgcccagttcgacgcttttacccggcagcaaatagaacgatatgaaaag
atgtcaaaggaactgcaagatgcattcccgcacaaaatactgcgccatatctgcaacaca
gccggtatcgaacgcttccccggtgcacagttcgacatggttcgtcttggcatcggattg
tatggaatcagtccgatcgataactcaatcatcaacaacgtgagtaccttgaaaacaacg
attctccaaatacgggacgtggcggaagaagatactgtaggttatagccgcaaagggcat
ctgatacgcccctcacgtatcgctgctatacccatcggatatgccgacggcctgaaccgc
catttgggatgcggacatggctattgccttgtcaatggcaaaaaagccccatacgtagga
aatatctgcatggatgtgtgcatgatcgacgtaacggatattgattgtagagaaggtgat
caagctatcatcttcggtgacgaattaccgattaccgtcttatcggatgcgctcgaaacc
atcccttatgaagtattgacaggcatttcaacccgggtcaagagagtatattatcaagat
taa
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