Bordetella flabilis: BAU07_18800
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Entry
BAU07_18800 CDS
T04592
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bfz
Bordetella flabilis
Pathway
bfz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BAU07_18800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfz03400
]
BAU07_18800
Enzymes [BR:
bfz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BAU07_18800
DNA repair and recombination proteins [BR:
bfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BAU07_18800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ANN78894
UniProt:
A0A193GHZ2
LinkDB
All DBs
Position
4261089..4262078
Genome browser
AA seq
329 aa
AA seq
DB search
MPEPPDFIKPPLATLVDGPPPSGYAYELKFDGYRMLCLIDGSGVRFFSREAKDWTPKLAD
LVQRIEALKLTGTGWLDGEIVVMDEHGVSSFQRLQNAMDKSVAKQVQYVAFDIPYWNGKD
LRAYPFVERAKALQAVLAGVPENAAIICSTVAEVESRDHAVSLLAQACERKLEGLIGKRL
DAPYRAGRTDTWIKLKCRPRQEFVVGGWTNPGGSRNAFGALLVGLREGDRLRYSGRVGTG
FSGSTLDMLMKRLTPLATEEMPFIEKPVLSDRWGGNSKPTMHWVRPELVVEVAYTTITDG
GILRQASFQGVREDKPARKVTGERARRIR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccagagccgccggacttcatcaagccgccgctggccacgctcgtggacgggccgcca
cccagcggctacgcctacgaactgaagttcgacggctaccgcatgctatgtctcatcgac
ggatcaggcgtgcggttcttcagccgcgaggcgaaggactggacgccgaagcttgccgat
ctggtgcagcgcatcgaggcgctgaaactcaccggtaccggctggctcgacggcgagatc
gtggtgatggacgagcacggcgtgagcagcttccagcgcctgcagaacgccatggacaag
agcgtggcgaaacaagtgcagtatgtggcgttcgacatcccgtattggaacgggaaggac
ctgcgtgcgtaccccttcgttgagcgcgcaaaggcgcttcaggcggtcctggccggggtg
cctgagaacgcagccatcatatgcagcacggtcgctgaggtggaatccagggaccatgcc
gtgtcgctgctcgcgcaggcgtgcgagcggaagctggaaggcctgatcggcaagcgcctt
gacgcgccctatcgcgcggggcgcaccgacacatggatcaagctcaaatgccggcccagg
caggaattcgtcgtgggcggatggaccaatccaggcggatcacgcaacgccttcggtgcc
ctgctcgttggcttgcgagaaggcgacaggctgcgctattcaggccgcgtaggcactggg
ttcagcggaagcaccctcgacatgctgatgaagcgcctgacgccgctggctaccgaggaa
atgccgttcatcgaaaagcccgtgctgtcggaccgctggggcggcaattcgaagccgacc
atgcattgggtcaggcctgagcttgtcgttgaagtggcatacacgacgattacagacggc
ggcatcctgcggcaggcgtcgttccaaggcgtgcgcgaagataagcccgcgcgcaaggtg
accggcgaacgcgcgagaaggatacgctaa
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