KEGG   Bufo gargarizans (Asiatic toad): 122924311
Entry
122924311         CDS       T07965                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122924311 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bgar03041]
    122924311 (SF3A1)
Spliceosome [BR:bgar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122924311 (SF3A1)
 Complex B
    122924311 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    122924311 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 122924311
NCBI-ProteinID: XP_044131200
EnsemblRapid: ENSBGGG00000004343
LinkDB
Position
1:507915548..507958645
AA seq 803 aa
MPAGPVQLLAPQAPDGGQQQMEEEKKEDVIPSKPIVGIIYPPPEVRNIVDKTASFVARNG
PEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQQQSVQ
QLPQKVQAQVVQETIIPKEPPPEYEFVADPPSISAFDLDVVKLTAQFVARNGRQFLTQLM
QKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLHIKLKKEAENPTEVLDQVRYR
VEWAKFQERERKKEEEEKERERVAYAQIDWHDFVVVEIVDFQPNEQGNFPPPTTPEELGA
RILIQERYEKFGESEEVEMEVESDDEEDAKNGKNEESSQMDQDTQVQDMDEGSDDEDYAQ
KAPLPPESPMPPPLPPTPDQVIVRKDYDPKASKPQPPAPASDEYLVSPITGEKIPASKMQ
EHMRIGLLDPRWLEQRDRSIREKQGDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGK
KIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPDEDGKDKIG
PSKPNEINQPPPPSAPTIPSSAPQMNSAPRPPPPVSLHQQINPPVSRPPTMPPPMRTTMV
SAVPVMQRPPMGSVVRLPHGSVLAAPMPPILHAPRINVVQMPPNPPPVMAQRAPHMIVPA
AFVPAPPVAPVPTPAPLPPSHPPPPMEDEPSAKKMKNEDSLIPEDEFLRRNKGPVTVKVQ
VPNMQDKTEWKLSGQVQAFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYDGIFIKDSNSL
AYYNMQNGATIHLALKERGGRKK
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccggcgggacccgtacaattgctagcgcctcaggcgcccgatggagggcagcagcag
atggaggaggagaagaaagaagatgttattccatctaagcccatcgtgggaatcatctac
cctcctccagaggtccgcaatattgttgacaagacggcaagctttgtggcaagaaatggc
ccagagtttgaagccagaattcgccagaatgaaattaacaatcccaaatttaatttctta
aacccaaacgatccttaccatgcttactaccgtcacaaagtcaatgaattcaaagagggg
aaagcacaggaaccgtctgcagccattcctaaggtcatgcagcagcaacagtctgtacag
caacttcctcaaaaggtccaggctcaggtcgttcaagagaccatcattccaaaggaacct
cctccagagtatgagtttgtggcagatccgccttctatatctgcctttgaccttgatgtg
gtgaaactgacggctcaatttgttgcacgtaacggtcgccaattcctcacacaacttatg
caaaaggaacagagaaattaccagtttgacttccttcggcctcagcacagtctcttcaat
tacttcaccaagcttgtggagcagtacaccaagatcctgattcctccaaagggattacac
atcaagctgaagaaagaggctgagaaccccaccgaggtgttagatcaggttcgttaccgt
gtagagtgggcaaagtttcaagagcgggaaaggaagaaagaggaggaggaaaaagaaagg
gagcgagtggcgtatgctcaaatagattggcatgattttgttgtggtagagattgttgac
ttccaacccaatgagcaaggtaactttcctcctccaacaacgcctgaagaattgggtgct
cgtattttaatccaagaacgatacgaaaagtttggagaaagtgaggaagtggagatggag
gttgaatctgatgatgaggaagacgctaagaatggcaaaaatgaagaatcttctcaaatg
gatcaggatactcaagtgcaagacatggatgaaggctcagatgatgaggattatgctcaa
aaggctcctcttcctccagagtcgccaatgcctccacctttaccgccaactccagatcaa
gtaattgttcgtaaagactatgatcccaaagcctctaagccacagccgcctgcacctgca
tcagatgagtatctagtatcgcctatcactggtgagaagattcctgccagcaaaatgcag
gagcacatgcgcattggacttttggatccacgttggctggagcagagagatcgctctatt
cgtgaaaaacaaggagatgatgaagtatatgctccaggattggatattgaaagcagcttg
aagcagctggctgaacgccgtaccgatattttcggtgttgaagaaacggctattggtaaa
aagattggagaggaagagatccagaaaccagaggagaaggtcacgtgggatgggcattct
ggcagcatggcacgtacgcaacaagcggcacaggcaaatataactctccaggagcaaatt
gaagctatccataaggctaaggggttggtaccagatgaagatggcaaggacaaaattggt
cctagcaagcctaatgaaatcaaccaaccaccaccaccttctgcacctaccattcctagt
tctgcaccacaaatgaattctgctccaaggccacctccaccagtgtcacttcaccaacag
atcaaccctcctgtgtctcgaccaccaaccatgccgccacctatgcgtactactatggtg
tctgctgttcctgtaatgcaaaggcccccgatgggatctgtggttcgtcttcctcatggt
tctgtattggctgctcctatgccaccaattttgcacgcacctaggattaatgtggtgcaa
atgccgccaaacccacctccagtgatggcacagagagcaccacacatgattgttccagct
gcatttgttcctgccccacctgtggcccctgtacctacaccagcgccactgcccccatct
catcctccaccaccaatggaagatgaaccatctgccaagaaaatgaagaatgaagattca
ttaattccagaagatgagttcttgcgtaggaacaaaggtcctgtcacagtcaaagtacaa
gttcccaacatgcaagataagactgaatggaagctgagcggtcaagtgcaggcgtttact
ctgcctctcactgatcaggtctctgtaataaaggttaaaattcatgaagcaactggcatg
ccagctgggaaacagaaacttcagtatgatggtatctttattaaggactcaaactccctg
gcttactacaacatgcagaatggagcgacaatccacctggctttgaaagagagaggaggc
cgaaagaaatga

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