Bufo gargarizans (Asiatic toad): 122924694
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Entry
122924694 CDS
T07965
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03022
Basal transcription factors
bgar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122924694
09124 Replication and repair
03420 Nucleotide excision repair
122924694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122924694
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122924694
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122924694
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122924694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
C1_2
Castor1_N
Matrix
Motif
Other DBs
NCBI-GeneID:
122924694
NCBI-ProteinID:
XP_044131972
EnsemblRapid:
ENSBGGG00000004906
LinkDB
All DBs
Position
1:657530053..657570892
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKSTIDEILFKDKRKRVFEHHGQVRLGMMRH
MFVIIDGSRTMEDQDLKPNRLTCTLKLLEYFVDEYFDQNPISQVGLLITRNKRAEKLTEL
AGNPRQHITALKKAVDMTCSGEPSLFNSLNLALQTLKHMPGHTSREVLVIFSSLTTCDPS
NIYDIIKSLKASKIRVSVIGLSAEVRVCTVLTRETGGDYHVILDESHYKELLMRHVSPPP
ASNSSECSLIRMGFPQHTMGSLSDQDAKPSFSMAHLDSNSEPGLTLGGYFCPQCKAKYSE
LPVECKVCRLTLVSAPHLARSYHHLFPLDAFKEVALAEYKGERYCRGCDGELKDQQVYIC
TICDCVFCVECDLFIHDSLHCCPGCIHTRPNSSIS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagaaagaaccaagcggtgggaaggcggctacgagagaacatgggag
gttctcaaagaggatgagtcgggatcgctgaagtctaccatcgatgagattctgttcaag
gataaaaggaagagagtttttgaacatcatggacaagttcgtttgggaatgatgcgtcac
atgtttgtgataattgatggatccagaacaatggaggatcaagacctgaaacccaacaga
cttacgtgcaccttgaaattgcttgagtattttgtggatgaatactttgatcaaaaccct
ataagtcaggttgggcttctcatcacgagaaataaaagggctgaaaagctgacagagctt
gctgggaaccctaggcaacacataactgcattaaagaaagccgtagacatgacctgcagc
ggcgagccttctctcttcaattctctcaaccttgcattgcagacactgaaacacatgcca
ggacacacaagtcgtgaagtcttggtgatttttagcagcctgacaacatgcgatccatcc
aatatatatgatattatcaagtccctgaaagccagcaaaatcagggtgtctgtcataggg
ctttccgcggaggtgcgtgtctgtactgtgctcactcgggagactggaggagattatcat
gttattctggatgagagtcactataaggaacttctgatgcgccatgtcagtcctcctcct
gccagcaacagctctgagtgctctcttatacgcatgggcttccctcagcatacaatgggt
tctctgtctgatcaagatgcaaagccatcatttagcatggcgcatctggatagtaacagt
gaaccaggcctcactcttggtggctacttttgtccacaatgcaaagcaaaatactcagaa
ttacctgtggaatgcaaggtttgccgtcttacattagtgtctgctcctcacttggctcgg
tcataccatcacttatttcctctggatgcttttaaagaagttgctcttgcagaatataaa
ggggagaggtattgccgtggctgtgatggagagctgaaggatcaacaagtttacatttgc
acaatatgtgactgcgtcttctgtgtggagtgcgacttgttcattcatgattctttgcat
tgttgtcctggttgtattcacactcggccaaactcatcgatatcatga
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