Bufo gargarizans (Asiatic toad): 122929002 Help Entry 122929002         CDS       T07965                                  Symbol LIG1 Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism bgar  Bufo gargarizans (Asiatic toad) Pathway bgar03030   DNA replication bgar03410   Base excision repair bgar03420   Nucleotide excision repair bgar03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bgar00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     122929002 (LIG1)    03410 Base excision repair     122929002 (LIG1)    03420 Nucleotide excision repair     122929002 (LIG1)    03430 Mismatch repair     122929002 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bgar03032]     122929002 (LIG1)    03400 DNA repair and recombination proteins [BR:bgar03400]     122929002 (LIG1) Enzymes [BR:bgar01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      122929002 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      122929002 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      122929002 (LIG1) DNA replication proteins [BR:bgar03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     122929002 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      122929002 (LIG1) DNA repair and recombination proteins [BR:bgar03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      122929002 (LIG1)    NER (nucleotide excision repair)     Other NER factors      122929002 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      122929002 (LIG1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  122929002 NCBI-ProteinID:  XP_044138337 EnsemblRapid:  ENSBGGG00000011646 LinkDB All DBs Position 2:695583943..695713977 Genome browser AA seq 936 aa AA seqDB search MQRSIKSFFQPKAEAVTKKEKKLEEVEIESKERKKSCNKDKSTEQPLKEKNGKLSTNGAK SPIKRVSKKSTRVLTSDSEDDESMEVEVSATEKDSKTTDDAKVVTSGEVISSSSSHSPDA SCRTGSADVPPSSIPKRKTARKQIPKRKLDSVQETPSLQKKENDVEEKPAKRQLQETALS AVMKTEEKEEDEKVDSKSSEQIKEKALSAVMKTEEKEEDEKVDSKSSEQIKEKAASPKPV KVEQNVENSEKITADKSPAPTKGPKNLGSFFGTGKQEVSQKETDYNPSKSGYHPVKDACW SAGQIVPYLAVARSFEMIENESARLKNIETLSNFLRSVICLSPGELLPCIYLCLNRLGPA YEGLELGIGETILMKAVAQATGRQLDKIKAEAQEKGDLGLVAESSRGNQRTMFTPPKLTV PGVFNKLKEIARMSGNAVTNKKIEIIKGLFVACRHSEARYIARALGGKLRIGLAELSVLS AIAQAVSLTTPDQSSPDAVIDASKGMSTDAKKAWIEENALILKQTYCELPNYDLVIPALL KHGIKELPQHCKLTPGVPLKPMLAHPTKGVGEVLKRFDEAAFTCEYKYDGERAQIHILEN GEVHVYSRNQENNTTKYPDIIARIPQVKKDTVKSCIFDSEAVAWDPQKKQIQPFQVLTTR KRKDVEASDIKVQVCVYAFDMLYLNGESLVREPFSKRRQLLRESFTELEGQFMFATYMDT SNTDEISEFLDQSIKDSCEGLMVKTLDQNATYEIAKRSHNWLKLKKDYLEGLGDTLDLVV IGGYFGKGKRTGIYGGFLLASYDEESEEYQTICKIGTGFTDEDLENHHSLLKDHVIDNPR SYYRWDSATEPDHWFEPVQVWEVKCADLSISPVHKAAIGLVEDQRGISLRFPRFVRVRDD KKPEEATNSSQVAELYKKQQQIQNVNATEKDDDDFY NT seq 2811 nt NT seq  +upstreamnt  +downstreamnt atgcaacgcagtataaagtcgttttttcaacccaaagcagaagctgttaccaagaaggaa aagaaattggaggaggttgagatcgagtctaaagaaagaaagaaatcctgcaacaaagat aaaagcaccgagcagccattaaaagaaaaaaatggtaaattatctacgaatggtgcaaag tctccgataaaacgtgtgtcaaagaaatcaacgcgagttctgacaagtgacagtgaagat gacgaatcgatggaagttgaagtgtccgctacagaaaaagatagtaaaaccactgacgat gcaaaggtggtcacaagtggagaagttattagttctagtagcagccattccccagatgcc tcctgtcgtactggttcagcagatgtgcctccctccagcatccctaaacgaaaaacagct cgtaagcagataccaaaaaggaaactcgatagtgtgcaggaaacacctagtctgcagaaa aaagagaatgatgtcgaagaaaaacctgcaaagcgtcaactgcaagaaacggctctaagt gcagtcatgaagacagaggaaaaggaagaggatgaaaaagttgacagtaaatcttctgag cagataaaagaaaaagctctaagtgcagtcatgaagacagaggaaaaggaagaggatgaa aaagttgacagtaaatcttctgagcagataaaagaaaaagctgcaagccctaagcctgtt aaggtggaacaaaatgtagaaaattcagaaaaaattactgcggacaagtctcctgctcca accaagggacccaaaaatctcggcagtttctttggtaccggtaagcaagaggtttcacag aaggagacagattacaatccgtccaagagtggttaccatcccgtgaaggatgcctgctgg agcgccggccagattgttccatacttagctgttgcacgttcttttgagatgatagaaaat gagtctgctcgcttaaagaacatagaaacgctgagtaatttcctgcgctctgtcatctgt ttgtctccgggggagcttctgccatgtatctatctctgtctgaaccgcctgggtcctgcc tatgaaggtcttgagcttggcattggagaaaccatattaatgaaagctgttgcacaagcc acaggtcgacaattagacaaaattaaggctgaagctcaggagaagggtgacctaggactt gttgcagagagcagccgtggtaatcagcgcaccatgttcacacctcccaagctcacagtc cccggtgtttttaacaagctgaaagagatagccaggatgtctggtaatgctgttacgaat aagaagattgagatcattaaaggcttgtttgttgcgtgcaggcattctgaggcgcgatac atagctagagctctaggaggaaaacttcgaataggactggcagagctgtccgttctctca gcgattgcccaagctgtttccttaacaacaccggatcaatcatctccagatgcggtaata gatgcttcaaagggtatgagtacagatgccaaaaaagcttggattgaagagaatgccttg atcttgaagcagacatactgtgaattaccaaactatgatttggttattcccgccctcctg aagcatggaatcaaagaacttcctcaacactgtaaactcactccaggggtccccttaaag ccgatgttggcacaccccaccaagggtgttggcgaagtattgaaaaggtttgatgaagct gcttttacttgtgaatataagtacgatggagagcgcgcccagatacatatactggagaat ggagaagttcatgtctacagcaggaaccaagaaaataatactacaaaatatcctgatata attgccaggatcccgcaggtaaagaaggatacagtgaagtcctgtatatttgactcagaa gctgttgcatgggaccctcagaaaaagcaaatccagccattccaagttctaactacacgg aaacgaaaggatgttgaagcttctgacataaaagtccaggtctgtgtgtacgctttcgac atgctttaccttaatggagagtctttggtcagagagccattttctaaacgaaggcaactc cttagagaatcctttaccgagctggaaggacagttcatgttcgccacatacatggatact tcaaacacagatgaaatttcagaatttcttgatcaatctataaaagattcttgtgaaggt ttgatggtaaaaacgctggaccaaaatgcaacatatgaaattgcaaaacgttcccataat tggttaaagttgaaaaaagactatttggaaggtttaggagacaccttggatctggtggtg attggtggttactttggaaaaggaaagcgaacgggcatatatggaggatttttacttgca tcatacgatgaagaaagtgaagaatatcagaccatatgcaagattggaacaggctttaca gatgaagacttagaaaatcatcacagtttgctaaaggatcacgtgattgacaatccgaga agttactatcgctgggacagtgctacagagccagaccattggtttgaacctgttcaagtc tgggaagtaaaatgtgcagatctttcgatttcccctgttcataaggcggctattggactg gtggaagatcaaaggggaatctccctgcgtttccctcgttttgttcgtgttagagatgat aaaaagcccgaagaggcaacaaacagttctcaggtcgcagaactatacaaaaagcagcag caaatacaaaatgttaatgcgacagagaaagatgacgatgacttctattag

DBGET integrated database retrieval system