KEGG   Burkholderia gladioli BSR3: bgla_1g12430Help
Entry
bgla_1g12430      CDS       T01464                                 

Definition
(GenBank) DNA primase, small subunit
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bgd  Burkholderia gladioli BSR3
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bgd00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    bgla_1g12430
Enzymes [BR:bgd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     bgla_1g12430
DNA repair and recombination proteins [BR:bgd03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     bgla_1g12430
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1:1383022..1385700
Genome map
AA seq 892 aa AA seqDB search
MASKLAEYQRKRRFDASPEPAGKRGAQARPRHDPERELHFVVQEHHARRLHYDFRLELDG
VLKSWAVPKGPSTEPAEKRLAVHVEDHPLDYAGFEGEIPPGHYGAGSVRIDDQGVWRPDG
GIAGARRGYREGKLSFELDGHRLHGRWSLVRTHLPERNGKSSWLLIKARDEQAGPPGGER
IKAARKQPATAAAKRAGERAETHGDKHAEKHVEKQAEKRGAPPPRGKRAADRAGRREALP
ATLAPQLATLVAAPPEGEDWRYEMKFDGYRVLIRIAGRGRRRSVQVFTREGKDWSAKFRR
QCAALADLPVNNAWLDAEAVVLDARGLPDFGALQQALSAGEDAAIVFFVFDLPFLDGRAL
ADLPLDTRRERLAACFGGAGRQAVQLSPTLKGEPAELLAAASRAGLEGLIGKRADSPYRA
GRSASWIKLKCRQRQEFVIGGFSEPRGSRSGFGALLLGVHERPAQGRRRAGGLAYVGRVG
TGFDRRALDAIAARLRKIERGDAPFAVPPAERGDAVHWVEPRLVAECEFAGWTADGLVRQ
AAFIGLREDKPAGQIVRETAAPAGGQPTGGRMRTDHQATGSRSRGKAANHATGRNDDATV
AGVRVTHPERVVDTESGLRKIDVVRYYAAIAEHLLPQLAGRPVSLVRYMKGIDGPSFFQK
HAGPRGMGFVTRHPGLDPGHDALITLDDREALVGAAQFDALEFHTWNACVDRIERPDRLV
FDLDPDPALPWRAMIEAAQALRALLDALGLPCFCKTSGGKGLHLVVPITRHASWDQARDF
SQAVAQHLAGVAPERFSAKMGAQNRKGRIFVDYLRNGRGASTVAAWSARARPGMGVSVPI
DWDELPGTRGGAQWTIAEVPQRLASLRRDPWDGYEAARRRLTAAMRERLGKL
NT seq 2679 nt NT seq  +upstreamnt  +downstreamnt
atggccagcaagctcgccgaataccagcgcaaacgccgcttcgacgcgagcccggaaccg
gccggcaagcgcggcgcccaggcgcgcccgcgccacgatcccgagcgcgagctgcacttc
gtggtgcaggagcatcacgcgcggcgcctgcattacgacttccgcctcgaactcgacggc
gtgctgaagtcctgggcagtgccgaaggggccgagcaccgaaccggccgagaagcggctc
gcggtgcatgtcgaggatcacccgctcgactatgccggcttcgagggcgagataccgccc
ggccactacggcgcgggcagcgtgcgcatcgacgaccagggcgtctggcggcccgatggc
ggtatcgccggcgcgcggcgcggctatcgcgagggcaagctcagtttcgaactcgatggc
catcgtctgcatggacgctggtcgctggtgcgcacgcaccttcccgagcgcaacggcaag
tcgtcgtggctgctgatcaaggcgcgcgacgagcaggcgggcccgccgggcggcgagcgc
atcaaggccgcgcgcaagcagccggccacggcggcggccaagcgtgccggcgagcgtgcc
gaaacgcatggcgacaagcatgcagagaagcatgtcgagaagcaggcagagaagcgcggc
gcaccaccgccacgcggcaagcgcgcggcggatcgcgccggccggcgcgaggcactgccg
gccacgctcgcgccgcagttggcgacgctcgtggccgcgccgcccgagggcgaggactgg
cgctacgagatgaagttcgacggctatcgcgtgctgatccgcattgccggccgcggccgc
cgacgctcggtgcaggtgttcacgcgcgagggcaaggactggagcgcgaaattccgccgg
caatgcgccgcgctcgccgacctgccggtgaacaacgcctggctggacgccgaggccgtg
gtgctcgacgcgcgcggcctgcccgatttcggggccctgcagcaggcgctgtcggccggc
gaggacgccgccatcgtgttcttcgtgttcgacctgccctttctcgatggccgggcgctg
gccgacctgccgctcgatacgcgccgcgagcggctggcggcctgcttcggcggcgcgggc
aggcaagccgtgcagctttcgccgacgctcaagggcgagccggccgagctgctcgccgcg
gcgtcacgggccggcctcgaaggcctgatcggcaagcgcgccgacagcccttatcgcgcc
gggcgcagcgcgtcgtggatcaagctgaagtgccgccagcgccaggaattcgtgatcggc
ggcttcagcgagccgcgcggcagccgcagcggattcggcgcgctgctgctcggcgtgcac
gagcggcccgcgcaagggcgtcgccgtgccggcggcctggcttatgtcggccgcgtcggc
accgggttcgatcggcgcgcgctcgacgcgatcgcggccaggctgcgaaagatcgaacgc
ggcgacgcgccgttcgcggtgccgccggccgaacgcggcgacgcggtgcactgggtcgag
ccgcggctggtggccgaatgcgagttcgcgggctggaccgccgacggcctggtccggcag
gctgccttcatcggcttgcgcgaggacaagccggccgggcagatcgtcagggaaacggcc
gcgcccgccggcgggcaaccgacaggaggcaggatgaggaccgatcatcaggcgacgggc
tcgcgctcgcgcggcaaggccgcgaaccacgccaccggcaggaacgacgacgccacggtg
gcgggtgtgcgcgtcacgcatcccgagcgcgtggtcgataccgagagcggcctgcgcaag
atcgacgtggtccgctattacgccgcgatcgccgagcacctgctgccgcagctcgcggga
cggccggtttcgctggtgcgctacatgaagggcatcgacgggccgtctttcttccagaag
cacgcgggcccgcgcggcatgggtttcgtcacgcgccaccccggcctcgatcccgggcac
gacgcgctgatcacgctcgacgatcgcgaggccctggtcggcgccgcgcagttcgacgcc
ctcgaattccacacctggaatgcctgcgtggaccggatcgagcggcccgaccggctggtg
ttcgacctcgatcccgacccggccttgccgtggcgcgcgatgatcgaggcggcccaggcg
ctgcgcgcgctgctcgacgcgctggggctgccgtgcttctgcaagaccagcggcggcaag
ggcctgcacctggtggtgccgatcacgcgccacgcttcctgggaccaggcgcgcgatttc
tcgcaggcggtggcgcagcacctggccggcgtcgcgccggagcgtttctcggcgaagatg
ggcgcgcagaaccgcaagggccgcatcttcgtcgactacctgcgcaacgggcgcggcgcc
agcacggtggcggcctggtcggcgcgggcgcggccggggatgggcgtgtcggtgccgatc
gattgggatgagctgcccggtacccgcggcggcgcgcaatggaccatcgccgaggtgccg
cagcggctggcctcgctgcggcgcgatccctgggacggctacgaggcggcgcgccggcgg
ctcaccgcggccatgcgcgagcgcctgggcaagctctga

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