Paraburkholderia atlantica CCGE1002: BC1002_0883
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Entry
BC1002_0883 CDS
T01217
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BC1002_0883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_0883
Enzymes [BR:
bge01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
BC1002_0883
Transporters [BR:
bge02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BC1002_0883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
DEAD
RsgA_GTPase
AAA_22
AAA_25
AAA_30
AAA
Zeta_toxin
NACHT
AAA_24
ABC_ATPase
TsaE
AAA_28
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADG14979
UniProt:
D5W5D7
LinkDB
All DBs
Position
1:985010..986773
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AA seq
587 aa
AA seq
DB search
MGSGDASSPAVVLRRLWPFIKPLLWVVLGAIVAMAVSAGTDAAIPALLKPLLDKGFGSHA
VDKTKWLVPIAVIGLALIRGVSQYASGYLLAYVSNKILLELRLKMFDRMIHTSVAFFQRE
TASTVINAIVFEVNQILNVLLSVMVTLVRDSLTVIFLLGYLFYLNWRLTLIVAVLLPGIG
WLVGKINRRLRRLNREHQLLTNELSYIVEETVGGYKVVKVHNGEQYEMDRFNSMSRRLRG
YAMRMTVSGGLAQPLTQFLASIALAVVITIAVVQSSSDQTTVGGFVAFVTSMLLIISPLK
HLMDVNQPLQRGMTAAELIFGLIDEPAEPKGGGKPLARARGEVEFRDVSFTYGTSSTHNR
HTLDQVSFKVAPGEMVALAGPSGSGKTTLVNLLPRFFDPTGGAILVDGVALPEYDLHGLR
SQIAMVSQDVVLFNDTIAHNVAYGQEVDAEKVKAALRAANLWDTVQAMPQGIETLVGDNG
MMLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHR
LSTIERADRILVMEAGRIVERGSHRELLEQDGLYAHLHRIQFQQSPV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggcgatgcgtcgtcgccggccgtcgtcctgcggcgcctgtggccattcatc
aagccgctactgtgggtcgtgctcggcgcgatcgtcgcgatggcggtgagcgccggcacc
gacgccgccattcccgcactgctcaagccactgctcgacaagggcttcggctcgcacgcg
gtcgacaagaccaagtggctcgtaccgatcgcggtgatcggcctcgcgctgattcgcggc
gtgtcgcagtacgcatccggctatctgctcgcgtacgtgtcgaacaagatcctgctggaa
ctgcgtctgaagatgttcgaccgcatgatccacacgagcgtcgcgttcttccagcgcgaa
accgcgagcacggtgatcaacgcgatcgtcttcgaggtcaaccagattctgaacgtgctg
ctgagcgtgatggttacgctcgtgcgcgactcgctgacggtgatcttcctgctcggctat
ctgttctatctgaactggcgcctgacgttgatcgtcgcggtactgctgccgggcatcggc
tggctggtcggcaagatcaatcgccggctgcggcgcctgaaccgcgagcatcagttgctc
acgaacgagctgtcgtacatcgtcgaagagacggtgggcggctacaaggtcgtcaaggtg
cataacggcgagcagtacgagatggaccgcttcaactcgatgagccggcgcctgcgcggc
tacgcgatgcgcatgacggtatccggcggcctcgcgcagccgttgacgcagttcctcgcg
tcgatcgcgctcgcggtcgtgatcacgatcgcggtggtgcagtcgtcgtcggatcagacg
acggttggcggcttcgtcgcgttcgtcacgtcgatgctgctgatcatctcgccgctcaaa
catctgatggacgtgaaccagccgttgcagcgcggcatgacggcggccgagctgatcttc
ggtctgatcgacgagccggcggagccgaaaggcggcggcaagccactcgcgcgcgcgcgc
ggcgaggtcgagttccgcgacgtgtcgttcacctacggcaccagctcgacgcacaaccgt
cacacgctcgatcaggtgtcgttcaaggtcgcccctggcgagatggtcgcgcttgcgggt
ccgtcgggcagcggcaaaaccacgctcgtgaacctgctgccgcgtttcttcgatcctacc
ggcggcgcgattctggtcgacggcgtcgcgctgcccgagtacgacctgcatgggctgcgc
agccagatcgcgatggtgagccaggacgtcgtgctgttcaacgacaccatcgcgcacaac
gtcgcgtacggccaggaggtcgatgcggagaaggtcaaggcggcgctgcgggcggcgaac
ctgtgggacaccgtgcaggcgatgccgcagggcatcgagacgctcgtcggcgacaacggc
atgatgctttccggcggccagcgccagcgtctcgcgatcgcgcgcgcgatctacaaggac
gcgccgatcctgattctcgacgaagcgacgtcggcgctcgattccgagtccgagcgccac
gtgcaggcggcgctcgaaacgctgatgaagggccgcacgacgctcgtgatcgcgcaccgg
ctgtcgaccatcgagcgcgccgaccgcatcctcgtgatggaagcggggcggatcgtcgag
cgtggcagccatcgcgagctgctcgagcaggacggcttgtacgcgcatctgcatcgcatc
cagttccagcaaagcccggtttga
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