Paraburkholderia atlantica CCGE1002: BC1002_4750
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Entry
BC1002_4750 CDS
T01217
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02010
ABC transporters
bge03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BC1002_4750
03070 Bacterial secretion system
BC1002_4750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_4750
02044 Secretion system [BR:
bge02044
]
BC1002_4750
Transporters [BR:
bge02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BC1002_4750
Secretion system [BR:
bge02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BC1002_4750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
cNMP_binding
ABC_tran
SMC_N
AAA_22
Peptidase_C70
AAA_25
AAA_29
AAA_15
nSTAND3
Guanylate_cyc_2
NB-ARC
AAA_23
AAA_16
AAA_21
MobB
NACHT
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADG18715
UniProt:
D5WJS0
LinkDB
All DBs
Position
2:complement(1679837..1682905)
Genome browser
AA seq
1022 aa
AA seq
DB search
MDAPQTAPSAPSTAEFLASVEILSPFSRDELERLAEYAQAKFYSFGETVCSAGEVADGLY
VIRSGTVRIFTEEHGKETSMGVRKSGEFFADIAMLRSYVHEASVRSSGKTEVLFIPRSAI
EPVMAGNAAALAFVASYVAINSAGGFVAQLFDLRGKLNKAELEEYVRSVGAKRVAAGKEI
LKQDGREDRRLYVVRQGQVRIVRHEEGHDYTLATLGEGEIFGEKACLMRQEQMASVVATT
DTRLLVIPERTVHFILERNPKLREVLDERIRYGDRELQRQKRLEQRRKLPLMLDLQSKPE
LGEKIIRRFALVEQAEEMDCGAACLAMICRHYGIPMTLGKLRELANVTTQGATLDSLARA
GESLGFTTRGVQCTFDSLRGFDLPFIVHWEGYHYVIVYGLSKEYVWVADPALGFRKLSVE
DFERGWSGTCLLFTGGSQLLQMSAERSPWIRFVGYLKPYRKILGYLFLATFVIQVLGVIP
PLIIQNILDGVIVHQNVSLLHLLIGGLIISNLFTQLMSTIRAYLANFMVRNMDFAMMSQF
FKHTLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMIFIYFTIMFVYNV
KMTLVLIAFVIPIMGLTVIATPKIKGYAREVFTASTNAKSFLMEALAGVETVKGMGIERP
VRLRWEKKYAKALELQYRAHAFNILVSFGSQLLNAATTIAILWVGANLVLARELTIGQLI
AFNAFMGSVLSPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQRPQDLPSRVMLPELQGE
ISLQGVYFRYGEEDSGYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYQPSEGKM
TIDGYDSGVIDKAYFRAQIGYVMQSNLLFSGTIAENIASGDDAPDRRRIEEVAKTADAHG
FISKMPLGYEQVVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILG
NMHDILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHEELIQRGGMYYQLVQKQLS
AS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggacgctccccagaccgcgccatccgcgccttccaccgccgaatttctggcctcggtg
gagatcctgtcgccattctcgcgcgacgaattggaacggcttgccgaatacgcgcaggca
aagttctattcgttcggcgaaacggtgtgctcggctggtgaagtggccgatggtctctat
gtaatccgctcgggcacggtgcgtatctttaccgaggagcacggcaaggaaaccagcatg
ggcgtgcgcaagtcgggcgagttctttgccgacattgcgatgttgcgctcgtacgttcac
gaagcgtcggtacggtcgtcgggcaagaccgaagtgctgttcattccgcgcagcgcgatc
gaaccggtgatggcgggcaacgccgccgcgctggcgttcgtcgccagctatgtcgcgatc
aattcggccggcggcttcgtcgcgcaactgttcgatctgcgcggcaagctgaacaaggcg
gaactcgaagagtacgtgcgcagcgtcggcgcaaaacgggtggctgccggcaaagagatt
ctgaaacaggacggccgcgaggaccggcggctttatgtggtgcggcaaggccaggtgcgc
atcgtgcggcacgaggagggtcacgactacacgctcgcgacgctcggcgaaggcgagatc
ttcggcgagaaggcgtgcctgatgcgccaggaacagatggcatcggtggttgcgaccacc
gacacgcggctactggtgatccccgagcgcaccgttcatttcattctcgaacgcaatccg
aaactgcgcgaagtactcgacgagcgcatccgctacggcgaccgcgaattgcagcgccaa
aagcggctcgaacagcggcgcaagctgccgttgatgctcgacctgcagagcaagccggaa
ctcggcgagaagatcatccggcgtttcgcgctcgtcgagcaggccgaggaaatggattgc
ggcgccgcgtgtctcgcgatgatctgccgccattacggcattccgatgacgctcggcaaa
ttgcgcgaactcgcgaacgtgacgacgcaaggcgcgacgctcgacagcctcgcgcgcgcg
ggcgagtcgctcggcttcacgacgcgcggcgtgcaatgcacgttcgattcgctgcgcggc
ttcgatctgccgttcatcgtgcattgggagggctaccactatgtgatcgtgtatgggctg
tcgaaagagtatgtctgggtggcggacccggcactcggtttcagaaaactgagcgtcgaa
gatttcgaacgcggctggagcggcacttgcctattgtttaccggcggatcgcaactgctg
cagatgtcggccgagcgctcgccgtggattcgttttgtcggatacctgaagccgtaccgc
aagatactcggctatctgtttctggcgaccttcgtgatccaggtgctcggcgtgattcca
ccgctgatcattcagaacattctcgacggcgtgatcgtgcatcagaacgtcagtctgctg
catttgctgatcggcgggctcatcatctccaacctctttacgcagttgatgtcgacgata
cgcgcgtatctggcgaacttcatggtgcgcaacatggactttgcgatgatgtcgcagttc
ttcaagcacacgttgtcgctgccgttctcgttcttcgcgaagcgcaagaccggcgatatc
ttcgcgcgctttcaggagaaccagacgatccgcgcgttcctgaccgaatccacggtgacg
accgcgctgaacctgctgatgatcttcatctacttcacgattatgttcgtgtacaacgtg
aagatgacgctggtgttgatcgcgttcgtgattccgatcatgggactcacggtgatcgcg
acgccgaagatcaagggctatgcccgcgaggtgttcacggcgtcgaccaacgcgaagtcg
ttcctgatggaggcgctcgctggcgtcgagaccgtcaagggcatgggcatcgagcggccg
gtgcgcttgcgctgggaaaagaaatatgcgaaggcgctcgaattgcagtatcgtgcgcac
gcattcaacattctggtcagctttggcagtcaattgctgaatgcggccacgacgatcgcg
atcctttgggtcggcgcgaatctggtactcgcacgcgaattgacgatcggtcagttgata
gcgttcaatgcattcatgggcagcgtattgagtccgctgatgggtctcgttggtttgtgg
agcatgctcaacgatgcgggtgtcgcgatggaacggctcggcgatgtgctcgatatcgag
cccgagcagaggccgcaggatttaccttcccgcgtgatgctgccggagctgcaaggcgaa
atcagcctgcaaggcgtgtatttccgctatggcgaagaggattccggttatgtgctcgag
aacatcagcttcgatatcaagcccggtgagctggtcgcgatcgtcgggcgcagcggctcg
ggcaaaaccacgctcgcgaagctgctggtcgggttctatcaaccgagcgaaggaaaaatg
acgattgacggctatgactccggcgtgatcgacaaggcttatttccgcgcgcaaatcggc
tacgtgatgcaaagcaatctgctgttttcgggcacgattgccgagaacatcgcgagcggc
gacgacgcgccggaccgccggcgcatcgaggaggtcgcgaaaacggccgacgcgcatggc
ttcatcagcaagatgccgctcggctatgagcaggtcgtcggcgagcgcggcatcggcttg
tcgggcggtcaaatccagcgtttgtgcattgcgcgcgcgttgtatcacgatccgcgtctg
ctcgtattcgacgaggcgacatcggcgctcgactcgcaatcggaaagcaatattctcggc
aacatgcacgacatcctgaagggccgcacggcggtgatcatcgcgcatcggctcagcacg
atcatgcgcgcggacaagattctggtcctgtatgaaggcgcgatcgtcgaacagggccgt
cacgaggagctgatccagcgcggcgggatgtactatcagctcgtgcagaaacagttgagt
gcatcatga
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integrated database retrieval system
