KEGG   Paraburkholderia atlantica CCGE1002: BC1002_5450
Entry
BC1002_5450       CDS       T01217                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bge  Paraburkholderia atlantica CCGE1002
Pathway
bge03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bge00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BC1002_5450
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bge02044]
    BC1002_5450
Secretion system [BR:bge02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BC1002_5450
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 TniB AAA_7 AAA_25 Sigma54_activat IstB_IS21 Clp_N nSTAND3 Zeta_toxin NACHT nSTAND1 ATPase_2 AAA_30 SRP54 DUF815 AAA_23 SLFN-g3_helicase CxC7 HGD-D DUF6285
Other DBs
NCBI-ProteinID: ADG19378
UniProt: D5WG02
LinkDB
Position
2:2459923..2462655
AA seq 910 aa
MDIDIRTLLSRLNPECKLAMEQAAQLCVRQTHYNVDVEHLLLTLLESDAPDLKAILAHFA
VKPETLSAQLQKTVDGFKRGNGRTPALSPNFSPLFQEAWLLSSMLLGEQQIRSGTLVLAL
LEVDTLRGMLLESAPALLNFPRAALRDRLAAILAGSSEDAGGSHMPGQDSEAAQPGAASA
SASSAARETGAMPNIAGGAGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLIDV
LLRRRQNNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGVKG
EFENRLKSVIAEVKASPVPVILFIDEAHQLIGAGGSEGQGDAANLLKPALARGELRTIAA
TTWAEYKKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVRDA
VKLSHRYISGRQLPDKAISVLDTACARVAIGQSGTPEEIEALGRTIEAAERQLRILRHEA
ATGADRADAIAVTTKQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPDSAAD
GEDAASLAVNLSRLEKGLEAMQNDEPMVPVCVDSETVAQVISGWTGIPVGRMLADELHTV
LYLQDKLAERVVGQDEALDAIARRVRTFRADLDDPGKPVGVFLLVGPSGVGKTETACALA
DMLYGGERNMITVNMSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLDEM
EKAHPDVLELFFQVFDKGVMEDGEGVPIDFKNTLILLTSNAAQDVITEASRGGRRPPPDE
LIEKLRPALLRQFSPAFLGRLVLVPYYHLGDAQINAIVNLKLERLAQRFERNHHAGLTWD
DDVATLIAQRCKEVDSGARNVDHILTQSVLPELARQVLERISISEPFGGVHLALSPTGAI
EFRFLSSEEA
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggatatcgatattcgcacgctgttgagccgcctgaatccggaatgcaagctcgcgatg
gaacaggccgcgcagctgtgcgtgcgacagacgcattacaacgtcgacgtcgagcatctg
ctgctcacgctgctcgaatccgatgcgccggacctcaaggccattcttgcgcacttcgcc
gtcaagcccgaaacgctgagcgcgcagctgcagaagacggttgatggattcaagcgcggc
aatggccgcacgccggcgctttcgccgaacttttcgccgctcttccaggaagcgtggctg
ctcagctcgatgctgctcggcgagcagcagatccgctcgggcacgctcgttctcgcgctg
ctcgaagtcgatactctgcgcggcatgctgctcgaatcggcccccgcactgctcaacttc
ccgcgcgcggccctgcgcgaccggctcgcggcgattctcgcgggctcgtccgaagatgcg
ggcggctcgcacatgcccggccaggactccgaagcggcgcagcctggcgcggcgtccgcg
tctgcatcgtctgcggcgcgagagacgggtgcgatgccgaacatcgcgggcggcgctggc
ggaagcggccgcaagtcggcgctggagttgtataccgtcgacatgaccggcctcgcgcgc
gaaggcaagatcgatccgattcgcggacgcgacgctgaaatccgccagttgatcgacgtg
ctgctgcgccgccgccagaacaacccgatcctcacgggcgaagcgggcgtgggcaaaaca
gccgtggtcgagggtttcgcccagcgcatcgtgcagggcgacgtgccgcccgcgctcgtc
aacgtgtcggtgcgctcgctcgatcttgcgctgctgcaggcaggcgcgggcgtgaagggc
gagttcgagaaccggctcaagtcggtgattgcggaggtgaaggcgtcgccggtgccggtc
atcctgttcatcgacgaggcgcatcagctgatcggcgcgggcggcagcgagggccagggc
gacgcagccaacctgctcaagccggcgctcgcgcgcggcgagctgcgcacgatcgccgcg
accacgtgggccgaatacaagaaatacgtggaacgcgatccagcgctcgcgcggcgcttc
caggtggtcaaggtcgaggagccgagcgaggccgtcgcgatcgacatgcttcgcggcatg
gtgcagaaactcgaagagcaccacggcgtggaaatcctcgacgacgcggtgcgcgacgcc
gtgaagctgtcgcatcgttacatctccgggcgccagttgccggataaggcgatcagcgtg
ctcgacacggcgtgcgcccgcgtggcgatcggccaaagcggcacgcccgaggaaatcgag
gcgcttggccgcacgatcgaagcggccgagcgccagcttcgcatcctgcgccacgaggcg
gccacgggggccgatcgtgctgacgccatcgctgtgactacgaagcagctcgacgacgcg
cgcgcgcagcgctcgcgcctcaccgacaagctcgccaccgaaaagcgcgcagtggaggag
atcctcgcgtggcgcaagaagattcgcggctatctgtcggacccggacagcgcggccgat
ggcgaggatgcggcatcgctcgcggtgaatctctcgcgcctcgaaaaaggccttgaagcc
atgcagaacgacgagccgatggtgcccgtatgcgtggactcggagacggtcgcccaggtc
atttcgggctggaccggcatccccgttggccgcatgctcgccgacgagctgcacaccgtg
ctgtatctccaggacaagcttgccgagcgcgtagtcggccaggacgaagcgctcgacgcg
atcgcgcggcgcgtgcgaacgttccgcgccgatctcgacgatccgggcaagccggtgggt
gtgttcctgctcgtcgggccgagcggcgtgggcaagaccgagacagcgtgcgcgctcgcg
gacatgctgtacggcggcgagcgcaacatgatcaccgtgaacatgtcggagtttcaggag
gcgcacagcgtgtccgggctcaagggcgcgccgccgggatatgtcggctacggacgtggc
ggcgtgctcaccgaggccgtgcgccgccgtccgtatagcgtcgtgctgctcgatgaaatg
gagaaggcgcaccccgacgtgctggagctgttcttccaggtgttcgacaagggcgtgatg
gaagacggcgaaggcgtgccgatcgacttcaagaacacgctcattctgctgacctcgaac
gccgcgcaggatgtcattaccgaagcgagccggggcggccgccgcccgccgcccgacgag
ttgatcgagaagctgcgcccggcgctgctgcggcagttcagcccggcttttctggggcgg
ctcgtgctcgtgccttactaccacctcggcgacgcgcagatcaacgcgattgtgaacctg
aagctcgaacggctcgcgcagcgcttcgagcgcaatcatcacgctggcctcacgtgggac
gatgacgtggccacgctgatcgcgcagcgctgcaaagaagtggatagcggcgcgcgcaat
gtggaccacatcctcacgcagtccgtgctgccggagctcgcgcgccaggtcctcgagcgc
atttcgatttccgaaccatttggcggcgtgcatctcgcgctgagtccgaccggcgcgatc
gagttccgcttcctctccagcgaggaggcgtaa

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