Blastomyces gilchristii: BDBG_07791
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Entry
BDBG_07791 CDS
T06540
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BDBG_07791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_07791
Enzymes [BR:
bgh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BDBG_07791
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
BDBG_07791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
RTT107_BRCT_5
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
8502264
NCBI-ProteinID:
XP_031580384
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MDSDGEQEPDGLRQADPNGEADLDERYPNRPRNHSPTLPFHDLFLTLFNPLNENKKRPTG
PALARRKVGPHGHGAAVHLSPQERRRDIIQRFISRWKKEVGDDIFPAFRLIIPEKDRDRA
MYGLKEKAIGKLLVKVMKIDKNSEDGFSLLNWKVPGQSFASRMAGDFAGRCFEVISKRPL
RTEVGDMTIEEVNEQLDKLSAASKEDEQVPILAYFYRMMNPEELMWLIRIILRQMKVGAT
ERTLFNIWHPDAEALFSISSSLRRVCWELYNPDIRLEGDEAKVTLMQCFQPQLAQFQMQS
FERMIQKMRLAEDDPTFWIEEKLDGERMQLHMESDDSIPGGKRFVFWSRKAKEYTYLYGN
GFFDENGALTRHLQKAFADGVQSIILDGEMITWDPEHDAIVPFGTLKSAALAEQRNPFST
GQRPLFRIFDILFLNGQPLTRYTLKDRRRALEASVIPVHRRFEIHTYEIGHSAADIEHLL
RKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYGSGRRGG
ALSSFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWIDWDPKRPP
TEYIELAGGDLQYERPDVWIKPEDSVVLCVKASSVTPTDQFRLGLTVRFPRFKRLRMDKD
WHSALSIQEFMDLKSNIEREVKEKEFKVDDSRKLRHRRTTKKPLTVAGYDGGKKTKYAGP
SGKLFNGLNFFVMTESVHQPKKTKAQLEQLVKANGGKIYQTNTAAENTICIADRRTVKVA
SLQKNAKENVIRPSWLFDCLSQNERDHGLPDLLIPLEPKHMFFTTVDQEEEIAGNVDKYS
DSYARDIDASELKKLLDAMAPAPGLPPSSISQLESQLESHSLNEQESPTATVSNNPLSPG
WLFKGLVIYFATPPSKSNDEKGKKPHILAQRLQLASNLVEFAGGEAITDDSDMKDPRITH
IVVDSKSSGDKAGMLVTNVAEIRRAISSLAGVGKQIPHIVGVEWVEESWRERTLVDEELY
SGYVPR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggattcggatggagaacaagaaccagacggtctacgacaggcagacccgaacggcgaa
gctgacctggacgagagatatcccaatcgccctcgtaaccactcacccaccctaccattt
catgacttattcctaaccctatttaaccctctcaatgaaaacaaaaagcgtccaaccggc
ccggcgcttgcgcgaagaaaggtcggccctcatggacatggtgctgccgtccatctaagc
ccacaagagcggcgaagggacataattcagaggttcatttcgcgatggaagaaagaagtg
ggtgacgatatatttcctgcatttcgcttgatcattccagagaaagacagagatcgagct
atgtatggattgaaggagaaagccatcggcaagttgctggtgaaagtcatgaaaatcgac
aagaactccgaggatgggtttagcttattgaactggaaagttcccgggcagagttttgcg
agcagaatggctggtgactttgccggacgctgtttcgaagtcatatcaaagaggccgttg
aggactgaggtgggcgacatgaccatcgaagaagttaatgagcaactagataaattgtcc
gcagcttcaaaggaagatgagcaggtgcctattcttgcatatttttacagaatgatgaac
cctgaggagttgatgtggcttatccggattattctacgacaaatgaaagtcggtgccaca
gaacggacacttttcaatatctggcacccggatgcagaggcattgtttagtatttctagc
agtcttcgccgagtctgctgggagctttataacccagatattcgcttggaaggggatgaa
gccaaggtcactctgatgcagtgttttcagcctcagctcgctcagtttcaaatgcaatcg
tttgaacgtatgatccaaaagatgaggctggccgaagacgatccaactttttggattgag
gagaagcttgacggagaacgtatgcagctccatatggagtccgacgattcgatacctgga
gggaagaggtttgtattctggtcgcgaaaggccaaggaatatacgtatctgtacggtaat
ggattctttgacgagaacggggcgctcacgagacatctccagaaggcctttgcggatggt
gttcaaagcatcatcctggatggagagatgattacctgggaccctgagcatgatgcgatt
gttcctttcgggactctcaagagtgccgcactagccgagcaaaggaatccattctcgaca
gggcagaggccattatttcgtatatttgatatccttttcctaaacggccaaccactcacg
agatacacgttgaaggaccgcagaagagcacttgaagctagcgttattcctgtgcatcgc
cgtttcgaaattcacacttacgaaattggccacagtgccgctgatatcgaacatttactc
cggaaagtcgtcgccgaagcatctgaaggccttgttctgaagaaccccaactctccatac
cgtctaaatgaacgtcacgatgactggatgaaggttaaacccgaatatatgactgagttt
ggtgaatctctcgactgcatcgtaattggcggatattatggctctggtcgtcgaggcggc
gctctatcaagtttcctatgtggactaagagtagatgaatcacatgccaaaaagggggat
catcctacaaaatgctattcattttgtaaagttggaggaggttttactgctgctgattat
gcaaatattcgccatcataccgatgggaagtggattgattgggatccaaaacgacccccc
actgaatacattgaacttgctggaggtgatctacaatacgaacgacctgacgtatggata
aagcctgaagattctgttgttctctgcgtaaaggcctcatcagttaccccaactgaccag
ttccgcctcggcctgacggtgcggttcccgcgctttaaaaggctacgcatggataaggac
tggcatagtgccttgtcgatccaggagtttatggacctcaagtcaaatatcgaaagggaa
gtgaaagaaaaggaattcaaggttgacgattctcgcaagctacggcataggagaactacg
aagaagcccttgacagttgccggttacgacggaggcaagaagactaaatatgcgggtcca
tcggggaaattgtttaatggactcaatttttttgtcatgaccgaatcggttcaccagcct
aagaaaaccaaggcgcagcttgaacaactcgtgaaagcaaatggcggcaagatatatcag
acaaatacagccgcagaaaatacaatttgcatcgctgatcgcaggactgttaaggtagct
tcacttcaaaagaacgcgaaggagaacgtcatccggccatcatggctcttcgactgctta
tcacaaaacgaaagggatcatggccttccggacctgcttattccgttggaaccaaaacac
atgttcttcacaacggtagatcaagaggaagaaattgccggaaacgtcgataaatactcc
gatagctatgctcgagatatcgatgcctcggaactcaaaaagctcctcgacgctatggcc
ccagcgccaggtctacccccttccagtatatcccaactagaatcccaactcgaatcccac
agcctgaatgaacaagaatcaccaaccgcaacagtatcgaacaacccattatcccccggc
tggcttttcaaaggactagtcatatactttgccacgcctccatccaagtccaacgacgaa
aaaggcaaaaaaccacatatcctagcacagcgcctccagctcgcttccaaccttgtggag
ttcgccggcggcgaagccatcacggacgacagtgacatgaaggatccacgtatcacgcat
attgtagtcgacagcaaaagttccggcgataaggctggcatgctagtgacaaacgttgct
gaaataaggagggcgatttcatccctggctggggttgggaagcaaattccgcatattgtt
ggggttgagtgggtggaggagagttggagggagaggacgttggttgatgaggaactttat
tcaggatatgtaccaaggtga
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