Bordetella genomosp. 13: CAL15_04840
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Entry
CAL15_04840 CDS
T05441
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm00500
Starch and sucrose metabolism
bgm01100
Metabolic pathways
bgm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CAL15_04840
Enzymes [BR:
bgm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
CAL15_04840
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
DUF3459
Glyco_hydro_31_2nd
ISOA1-3_C
hDGE_amylase
GHL10
Motif
Other DBs
NCBI-ProteinID:
ARP93766
UniProt:
A0A1W6Z8N9
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All DBs
Position
1039567..1041762
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AA seq
731 aa
AA seq
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MPNQPRITEGSPFPLGATLTGDGVNFALFSANATRVDLCLFDEAGEKQIQCITLPEFTDE
IWHVHVDGLKAGAVYGYRVYGPYDPENGHRFNPNKLLLDPYAKSYVGELKWDPAVFGYVM
GDEQGDLTFDERDSAPFMPKCRVVDQEFTWTHATKVRVPWERTIFYETHVRGYTKRHPAV
PEALRGSFAGLAQDAVIDHIKSLGVTSVELLPIHAFVNDSHLLDQGLTNYWGYNTIGFFA
PDPRYFSRQPGAITELKQMIDRFHEADLEVILDVVYNHTAEGSELGPTLSFRGIDNASYY
RLLPDQRRYYINDTGTGNTLNLSHPRVLQMVTDSLRYWVTEMNVDGFRFDLATVLAREPD
GFDYNSGFLKACQQDPILSSVKLIAEPWDCGPGGYQVGNFPPGWAEWNDRYRDTTRSFWK
GDDGKAAALAARITASGEDFNHRGRRPWASVNFLTAHDGFTLHDLVSYNDKHNEANGEGN
RDGHSDNQSWNCGVEGPTDDEGVRELRERQKRNMLATLLFSQGTPMIVAGDEFGRTQQGN
NNAYCQDNEISWVDWNVGEDGQALTEFVRKLITLRQTLPVLRRGRFLTGDFDESTGVSDV
RWLSPAGQDLTPEQWADTAMRCFGLVIDGRARVSGIRRPASDATLLLVFNAYHDAIEFTL
PEIPGPDRWTCLIDTNAPIRTELPEFASGDVYTVTGRSLLLFSLQAKGTTQRVIDKLADA
LTDEEGETART
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccagccacgaatcactgaaggttcgccgtttcccctgggcgcgaccctgaca
ggagacggcgtaaattttgcattgttctccgccaatgccacccgggtcgacttgtgcctg
ttcgatgaagcgggcgagaaacagatccagtgcatcaccttgcccgagttcaccgatgag
atctggcacgttcacgtcgacggcctgaaggcaggcgcggtgtatgggtaccgggtgtac
ggtccgtacgatcccgagaacgggcatcgcttcaatccgaacaaactgctgctcgaccct
tatgccaagtcgtacgtcggggaactgaagtgggaccccgcggtgttcggttatgtgatg
ggcgacgagcagggcgacctcacgttcgatgagcgcgacagcgcgcccttcatgccgaag
tgccgcgtggtcgaccaggagttcacctggacccatgccaccaaggtgcgggtgccctgg
gaacgcaccatcttctacgagacgcacgtgcgcgggtacacgaagcggcatccggccgtg
ccggaagcgctgcgcggcagcttcgccggcctggcgcaggacgcggtgatcgaccatatc
aagagcctgggcgtcacgtccgtggagctgctgcccatccacgcgttcgtgaacgacagc
catctgctggaccagggcctgaccaattactggggctacaacactatcggcttcttcgcg
ccggacccgcgttatttttcgcggcagcccggcgccatcaccgagttgaagcagatgatc
gatcgcttccacgaagccgatctcgaggtcatcctggacgtggtctacaaccatacggcc
gagggcagcgagctcggtcccacgctgtcgttccgcggcatcgacaatgcctcgtactac
cggctgctgcccgaccagcggcgctactacatcaacgacacgggcacgggcaacacgctg
aacctgtcgcatccgcgcgtgctgcagatggtcacggacagcctgcgctactgggtgacc
gagatgaacgtcgacggcttccgcttcgacctggccacggtgctggcgcgcgaaccggat
ggcttcgactacaacagcggttttctcaaggcttgccaacaggaccccatcctgtcgagc
gtcaagctcattgccgagccgtgggactgcgggccgggcggctaccaggtgggcaatttc
ccgccgggctgggccgaatggaatgacagataccgggacaccacgcgcagcttctggaag
ggcgacgacggcaaggccgcggccctggcggctcgcatcactgcctcgggcgaggatttc
aaccaccgcggccgacgtccctgggccagcgtcaacttcctgaccgcgcacgacggtttc
acgctgcacgacctggtgtcgtacaacgacaagcacaacgaggccaacggcgagggcaat
cgcgatggccattcggataaccagtcgtggaactgcggagtcgaggggcccaccgacgac
gaaggcgtgcgcgagctgcgcgagcgccagaaacggaacatgctggccacgctgctgttc
tcgcagggcacgcccatgattgtcgcgggcgacgaattcgggcgcacccagcagggcaac
aacaatgcctactgccaggacaacgaaatcagctgggtggactggaacgtcggagaggac
gggcaggccctgacggagttcgtgcgcaaactcatcacgctgcgccagacgctgccggta
ctgcgtcgcggccgtttcctgaccggggatttcgacgaaagcaccggcgtgtccgacgtc
agatggctgagtccggcaggccaggacctgacgcccgaacaatgggcggataccgccatg
cggtgctttggactggtcatcgatggacgcgcccgcgtcagcggcatacgccgtcccgcc
tcggatgcgacgctgctgctcgtcttcaacgcgtatcacgatgccatcgagttcaccttg
cccgagatccccgggcccgaccgctggacctgcctgatcgacaccaatgcgccgattcga
acggaattgcccgaattcgcatccggcgacgtgtatacggtcaccgggcggtcgctgctg
ctgttctcgctgcaggccaagggcacgacacagcgcgtgatcgacaagctggcggatgcc
ttgacggacgaggagggcgagaccgcgcgtacttga
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