Burkholderia gladioli ATCC 10248: BM43_2980
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Entry
BM43_2980 CDS
T03826
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03420
Nucleotide excision repair
bgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BM43_2980
03430 Mismatch repair
BM43_2980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgo03400
]
BM43_2980
Enzymes [BR:
bgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BM43_2980
DNA repair and recombination proteins [BR:
bgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BM43_2980
MMR (mismatch excision repair)
Other MMR factors
BM43_2980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AJW99700
LinkDB
All DBs
Position
1:3289146..3291515
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AA seq
789 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGFASPPTVLAVTF
TNKAAREMLSRLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKASNIDDEKYPSKNVQYFINNAKEQGLRPDKVDATDNFNRMFVELYQAYDQQCQR
EGVVDFPELLLRCYELLSLNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGGQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANHLISHNSHR
LGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIRSLINGGMARSEVAVLYRSNAQSRAI
EHTLMTAGIAYRVYGGLRFFERQEIKHALAYLRLIDNPSDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCAMAAAIPYVTGKAGTSLGTFANLIAKMRAETAQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARSIPLRPGAIAAPEITLDGG
ADEVLAPAELGDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFA
AVFITGLEEGLFPHENSALESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRYNI
RSRFFDELPQQVLKWLTPQVEAGSRWGGRADNAGWGRNWFSRPGGGNGGGLRESVVDAAV
SAPLPAFANAQRASGSGFKVGQPVFHTKFGEGTVTALEGEGADAKAQVRFKRHGEKWLAL
AVAKLQAVE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaacctgaaccccgaacaatacgctgccgtcacgctgccgaac
gagccggcgctgatcctcgctggtgcgggcagcggcaagacgcgcgtgctgatcacgcgg
atcgcctggctgatccagcagggtttcgcctcgccgcccaccgtgctggccgtgaccttc
accaacaaggccgcgcgcgagatgctctcgcgcctgtcggcgatgatgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctctgcaaccgcatgctgcgcgcgcactat
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgaccagctctcggcg
atcaagcgcctgatgaaggcctcgaacatcgacgacgagaagtacccgtcgaagaacgtc
cagtacttcatcaacaatgccaaggagcaaggcctgcgcccggacaaggtggacgccacc
gacaacttcaaccggatgttcgtcgagctctaccaggcctacgaccagcaatgccagcgc
gagggcgtggtcgacttccccgagctgctgctgcgctgctacgagctgctgagcctgaac
gcgccgctgcgcgcgcattaccaggcgcgcttccgacacatcctggtcgacgagttccag
gatacgaacaagctgcagtacgcctggctcaagctgctggcgggcggccagaacgcgatc
ttcgcggtgggcgacgacgaccagtcgatctacgcctttcgcggcgcgaacgtcggcaac
atgcgcgacttcgaggacgagttccgggtgcgcaacctgatcaagctggagcagaactac
cgctcgcacggcaacatcctcgatgcggccaaccacctgatctcgcacaattcgcatcgg
ctcggcaagaacctgcgcaccgacgcggggcacggcgagccggtgcgcgtctacgaggcg
gccaccgattcgcaggaagcgggctggatcgtcgaggagattcgctcgctgatcaacggc
ggcatggcgcgcagcgaggtggcggtgctctatcgcagcaacgcgcagtcgcgcgcgatc
gagcacaccctgatgacggcggggattgcctatcgcgtctatggcggcctgcgcttcttc
gagcgccaggaaatcaagcacgcgctggcctacctgcgcctgatcgacaatccgagcgac
gacaccgccttcgcgcgagtggtcaacttccccacgcgcgggatcggcgcgcgctcgatc
gagcaactggccgacgccgcgcgcctctacaactgcgcgatggcggcggcgattccctac
gtgacgggcaaggccggcaccagcctgggcaccttcgccaacctgatcgcgaagatgcgc
gccgagaccgcgcagatgagcctgccggaaaccgtcgaatacgtggtgcgcgccagcggc
ctggccgatttctaccagggcgagcgcgaagggcaggaccgcctggagaacctgcaggaa
ctggtcaacgcggccaccgccttcgtcagcgaggaaggctacgggctcgatacgccggcg
cgctcgatcccgctgcgccccggcgcgatcgcggcgcccgagatcacgctggacggcggc
gccgatgaggtgctggcgccggccgagctgggcgacccggcccagaaccccgacaccatg
acgccgctggccggcttcctctcgcatgcctcgctggaggccggcgacaaccaggcccag
gccggccaggatgccgtgcagctgatgacggtgcacgccgccaaggggctcgaattcgcg
gcggtgttcattaccgggctggaagagggcctgttcccgcacgagaacagcgcgctcgaa
tcggacggcctggaggaggagcgccggctgatgtacgtggcgatcacgcgcgccaaggag
cggctctacctgtccttcgcgcagagccggatgctgcatggccagacgcgctacaacatc
cgctcgcgcttcttcgacgagctgccgcagcaggtgctgaagtggctgacgccgcaggtc
gaggccggcagccgctggggcggccgcgccgacaacgccggctgggggcgcaactggttc
tcgcggcccggcggcggcaatggcggcggcttgcgcgagagcgtggtcgacgcggccgtg
tcggcgccgctgccggccttcgccaacgcgcagcgcgcgagcggcagcggtttcaaggtc
ggccagccggtgttccataccaagttcggcgagggcacggtgacggccctcgagggggaa
ggcgcggacgcgaaggcccaggtccgtttcaagcggcacggcgagaaatggctggcgctg
gcggtggcaaaactccaggcggtggaatga
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integrated database retrieval system
