Burkholderia glumae LMG 2196 = ATCC 33617: KS03_2826
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Entry
KS03_2826 CDS
T03820
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu02024
Quorum sensing
bgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS03_2826 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KS03_2826 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgu03019
]
KS03_2826 (hfq)
03036 Chromosome and associated proteins [BR:
bgu03036
]
KS03_2826 (hfq)
Messenger RNA biogenesis [BR:
bgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KS03_2826 (hfq)
Chromosome and associated proteins [BR:
bgu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
KS03_2826 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
AJY65689
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All DBs
Position
I:3107796..3108350
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AA seq
184 aa
AA seq
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MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDMGGSRPGGRGGPRTGGGGHGGRPPREGGGHNPYGSHGGQRESRGEGREGRSE
GYTPREPREPREYSAPREYGGSRDYPAPRESHEGVSTPPERTGNSPVIVTRRRRPLGPTG
GSNE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaacgccgctcgcaaggaa
cgcaagcgcgtcgaaatctacctcgtcaacggcatccgcctgacgggctgtatcgagtcg
ttcgatcagtacctggtgatgctgcgcacgccggtcggtttgcaaggcatctacaaacgc
gcgatttccaccatccagctcgacatgggcggctcgcggcccggcggccgcggcggcccg
cgcacgggcggcggcggtcacggcggccggccgccgcgcgaaggcggcggccacaacccc
tacggatcgcacggcggccagcgcgaatcgcgcggcgaaggccgcgagggccgcagcgaa
ggctacacgccgcgtgaacctcgcgagccgcgtgaatacagcgccccacgcgaatacggc
ggctcgcgcgactatcccgcgccgcgcgaatcgcacgaaggcgtctcgacgccgcccgag
cgcaccggcaacagcccggtgatcgtcacgcgccgccggcgcccgctcggccccaccggc
ggcagcaacgagtaa
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