Benincasa hispida (wax gourd): 120070353
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Entry
120070353 CDS
T07258
Name
(RefSeq) DNA ligase 6-like isoform X1
Organism
bhj
Benincasa hispida (wax gourd)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
UBA_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
120070353
NCBI-ProteinID:
XP_038878216
LinkDB
All DBs
Position
1:51307767..51356124
Genome browser
AA seq
1444 aa
AA seq
DB search
MPQERGHLYENPQKSKLQRLFLYFRALSRCLPLMASESSTPEPLTIDSSLCFVTAIESFS
RQLNLSLPPLKLPFRPPPFPSDFPQSKLIPKSRFVVDAFGHAGEYSLSYFLSHFHSDHYG
GLSPTWCKGIIFCSHLTACLLVEVLKVPLPFVQPLPLREPTTIDGCEVILVDANHCPGAV
QFLFKIPCGDGKFERYVHTGDFRFCDSMRVDPILETFTGSDAVFLDTTYCNPKFIFPSQE
ESIEYIVNIINKIGGGSKGSMGNVLFLVSTYVIGKEKILLQIASRCNRKIMVDARKMTVL
RVLGYGESGVFTEHESESDVHVVGWNVLGETWPFFRPNFVKMKDIMVEKGYSKVVGFVPT
GWTYELKHNKFSVRTKDSLEIHLVPYSEHSNYNELREYVKFLRPKRVVPTVGLDVDKLDS
KHAGKIKKHFAGLVDEMANRKEFLKGFHRGSSEMSDDADENTTKAENEFWEFEEKEISPC
MEISVKAEEACSSGMGLSSLQEVGSTNLFESNDEEQNKIIQELRECLPAWVTQDQILDLI
GSSGRNVVDAVSNFYERETEFYEHITTLTDNLPKHQSKVLDSPFTFPATDIKMKVVLGKV
DISSGQASKLSSPRGTTKSKTSPGKRKRNAQDKPKNKSKKNPSLQSDGSKQSTITKFFRK
ASHLSEGPKMKSTEEQSCQDQSSPNDVTEYVNKIDKFIQIINGDESLKTLVASLLVKTNG
DMNMALDLYYADPQERLGQNEKGHIFSENPVQTESNLDECISTQKENMLENVGLKTDLSK
LSGSMKKINETFLSLPPEEYDPVKHACWRYGQPAPYIHLVRTFDLLEEEKGKIKATSMLC
NMFRSLLVLSSEDVLPAVYLCTNKIAADHENMELNIGGSVVTAALEEACGVSRSKITEMY
NELGDLGDVALACRQTQRLLAPPSPLLIKDVLSTLRKVSVQTGSGSSVRKRNLIVNLMRS
CREKEMKFLVRTLVRNLRIGAMSKTVLHALAQAVFITSSLNIFKEGMVENLKEKLQNFSA
TVLDAYNLLPNFDLIVPSLMSKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
AFTCEFKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAE
VVAVDRKNNCRLMSFQELSSRGRGSKGSLVAVDSIKVDICVFVFDIMLANGEQLLGLPLR
HRRKYLKDLFGDGRPGYFEYAKEISIEKDDTCLNCESTLTKLNCFLGEAFQSSCEGIMIK
SLDVDAGYFPSKRSDTWLKVKRDYLEGLNDSLDLVPIGAWHGNGRKMGWFSPFLMACYNP
DTEEFQSVCRVMSGFSDAFYIKMKEFFSGDNILCKKPAYYQTAEVPDMWFLPQFVWEIRG
ADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSVPDRNPEECSTAADIAEMFNSQTRKMDV
ASGD
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagagaggggccatctctacgaaaatccacaaaaatcgaaactgcaacggctc
tttctttattttcgcgcactgagccgatgccttccgttaatggcttccgaatcttccaca
cctgaacccctgacaatcgattcttccctctgcttcgtcactgccatcgaatcgttttcg
cggcaactgaatttatctcttcctccgctgaagctcccattccgcccccctccttttccc
tccgatttcccccaatccaaactcatccccaaatcccgtttcgtcgtcgacgcattcggc
cacgccggcgagtattctctttcctatttcctctctcattttcactccgatcactatggc
ggtctctcccctacttggtgcaagggtattatcttctgctcccaccttactgcttgcctt
ttggtcgaagttctcaaagtccctttgcctttcgtccagccattgccgctccgggagcct
acaacaatcgatggttgtgaggtaatacttgttgatgccaatcattgtcctggtgcagtg
cagttcttgtttaagattccctgtggggatggaaagtttgagagatatgttcatactggt
gattttcggttttgtgattctatgagagtggaccctattttggaaacatttactggctcg
gatgcggttttcttggacactacgtactgtaatccgaagtttatttttccctcccaggag
gagtctattgagtatatagttaacatcataaacaaaattggtggtggaagtaagggttct
atggggaacgttctttttcttgtctcaacttatgtaattggaaaggaaaaaattttgctt
caaattgcaagtcgttgtaatcgtaagataatggtggatgctaggaaaatgacagtctta
cgggttttgggatatggtgagagcggggtgtttactgagcatgaaagtgaaagtgatgtt
cacgttgttggatggaacgtgttgggtgaaacctggcctttttttaggcctaattttgtt
aaaatgaaggatataatggtggaaaaggggtattctaaggttgttggttttgttccgaca
gggtggacttatgagttgaaacacaacaagttctcagtaaggaccaaggattcactagag
atacatcttgtgccatatagtgaacactcaaactacaatgaacttagggaatatgtgaag
tttttgagacctaaaagagttgttcccaccgtaggtttggatgttgataaacttgatagc
aagcatgctggaaaaattaagaagcactttgctggtctagttgatgaaatggccaacagg
aaagaattcttaaaagggtttcatcgtggatccagtgaaatgagtgatgatgctgatgaa
aataccacaaaggctgaaaatgagttctgggagttcgaggagaaggaaatttcaccatgt
atggagataagtgtcaaagcagaagaagcatgcagtagtggtatggggttgtcttctctg
caagaagttggttctaccaatctatttgagtcaaatgatgaggaacaaaacaagattatc
caggaacttcgtgagtgcttgcctgcatgggtcactcaggatcagatattagatctgatt
ggcagctctggaagaaatgtggttgatgcagtttctaatttctatgaacgagaaactgaa
ttttatgaacacattacaactctaacggataaccttcccaagcaccagagcaaagtacta
gatagcccatttacttttcctgcaacagatattaaaatgaaggtcgttttgggaaaagtc
gacatttcttcaggccaggcttcaaagttgtccagtccaaggggcacgaccaagagtaaa
acttctcctggaaaaaggaagagaaacgctcaggataagcccaaaaataagtcaaaaaag
aatccaagtctgcaatcggatgggtcaaaacaatctacaatcacaaagttcttcaggaaa
gcttcacatttgtcagaaggtcctaaaatgaaatctacagaagagcaaagttgtcaagat
caaagttctccaaatgatgttactgaatatgtaaacaagattgacaagtttattcaaata
ataaatggtgatgaatctttaaaaacacttgttgcatcattattggtaaagaccaacgga
gacatgaatatggcacttgacttgtattatgctgatcctcaggagaggcttggtcaaaat
gaaaagggtcacatcttcagtgagaacccagtccaaactgaaagcaatttagatgaatgc
atatctacccagaaggaaaacatgctagaaaatgttggactcaagactgatttgtctaag
ctgtcaggttcaatgaagaagattaatgaaacctttttatctctaccacccgaagagtat
gacccggtcaagcatgcctgttggcggtatggacagcctgccccatatatacatcttgta
cgtacctttgatctgcttgaagaggaaaaaggcaagataaaagctacatctatgctttgc
aatatgtttagaagtttattggttttgtcttctgaggatgtgctgcctgcagtgtatttg
tgcactaacaaaattgctgctgaccatgaaaacatggaactaaatattggtgggagtgtt
gtcacagcagcacttgaggaggcatgtggggttagtcgttcaaagataactgaaatgtat
aacgaattaggtgatttaggagatgttgctcttgcatgtcgccaaacacagagattattg
gcacctccatcacccctcctcattaaagatgtattatctacccttcgaaaagttagtgta
caaacaggtagtggaagttctgtgcgcaagagaaacctcattgtcaatctcatgcgatct
tgtagagaaaaggaaatgaaatttcttgtaagaaccttggttcgtaacttacgtatagga
gccatgtcgaaaactgttcttcatgctctggcccaagctgttttcataacttcgtcgctc
aacattttcaaggaaggaatggtggagaatttaaaggagaagcttcagaacttttcagct
actgtactagatgcatacaatctgcttccaaattttgatctgattgttccttctcttatg
agcaaagggattgaattctcatcatcgtctttatcaatggttccaggaatacctattaag
ccaatgctcgcaaagattaccaatggtatttctcaagcattgaaaatctttgagaataaa
gcttttacatgtgaattcaaatatgatggtcagcgtgcacaaattcacaaattggcagat
ggttctgtgcgagttttctctcggaacagtgatgatacaacgtcaaaatttccagatttg
atcgaaataattaatgaattgtgtaaacctgctgcctcaactttcatactggatgctgag
gttgttgctgttgataggaaaaataattgcagactaatgtctttccaagaactatcatca
cgtgggagagggagcaaaggctcactggttgctgttgatagcataaaggttgatatttgt
gtgtttgtctttgacatcatgcttgccaatggagagcaactgctgggattacctctccgg
catagacgaaaatacttgaaggatttgtttggtgatgggaggccaggatattttgaatat
gccaaagaaatttcaattgaaaaggatgacacctgcttaaactgtgaatccactttgact
aaattaaattgtttccttggagaagcattccagtcatcgtgtgaaggaattatgatcaaa
tctttagatgtagatgctggatattttccctcaaagcgtagcgatacatggttgaaggtc
aagcgggattatcttgaaggattgaatgattctcttgatttagtccctattggtgcttgg
catggaaatggaagaaaaatgggatggttcagccctttccttatggcttgttacaaccct
gacactgaagaatttcaaagcgtatgtcgtgttatgtcaggattctctgatgctttttat
attaagatgaaagaatttttttctggggataatattttgtgtaaaaagccagcttactat
caaactgctgaagttcctgatatgtggttcttgccacaattcgtttgggaaattagaggt
gcagacttaacagtgtcgccagttcaccaggctgctgtaggtttagttcatccttctcgt
ggtatctcaattaggtttccgagatttattcgttcggttcccgatagaaatccagaagaa
tgtagcacggctgcagatatagcagaaatgtttaattctcagacgaggaaaatggatgtt
gcatcaggagattaa
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