Benincasa hispida (wax gourd): 120088599
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Entry
120088599 CDS
T07258
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03082
ATP-dependent chromatin remodeling
bhj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120088599
03083 Polycomb repressive complex
120088599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120088599
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120088599
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120088599
HDAC complexes
Sin3A-HDAC complex
120088599
BRAF-HDAC complex
120088599
REST complex
120088599
SHIP complex
120088599
MiDAC complex
120088599
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120088599
Heterochromatin formation proteins
Other heterochromatin formation proteins
120088599
Chromatin remodeling factors
NuRD complex
120088599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Peripla_BP_7
Motif
Other DBs
NCBI-GeneID:
120088599
NCBI-ProteinID:
XP_038901934
LinkDB
All DBs
Position
10:complement(29554764..29559838)
Genome browser
AA seq
492 aa
AA seq
DB search
METGGNSLPSGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VFKPLPARDKVLCRFHADDYVAFLKSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHKVCDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKHYERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPVLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNTHQMLEEIQGKLLEYLSRLQHAPSVQFQERPPDTELPEAEEDQEDRDERWDPDSDMEV
DEERKPIPSRVKRETVESEIKDPEVNPESARGLEKAAPEATSAKALDIGSLKIEEPGVKL
EETSKQNDQMFP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagacaggaggcaattcattaccatctggacctgatggtgtgaagaggaaggtctgc
tacttctacgaccctgaggttgggaactactattatgggcagggtcacccaatgaagccg
catcgcatcagaatgacgcatgcccttcttgctcattatggcttactccagcatatgcag
gtcttcaagcctcttcctgcgagagacaaagtcctctgcagatttcacgctgatgattat
gtggcgtttcttaaaagcattacccctgaaacgcagcaagaccagctgagacagcttaag
cgcttcaatgtcggtgaggactgtcctgtttttgatggactctattctttctgtcaaact
tatgctggtggatctgttggtggtgccgttaagttaaatcataaggtttgtgatattgct
gttaattggtctggtggactacatcatgcgaagaagtgtgaagcttctgggttttgttat
gtcaatgatattgttttggccatactggagctccttaaacattatgagcgtgttttatat
gtcgacattgatatccaccatggagatggtgttgaagaggctttttatacaactgacagg
gtcatgactgtatcgttccacaaatttggagattatttccctggtacaggagatataaga
gacattggttatgggaaaggaaagtactactcccttaatgttccattggatgatggaatt
gatgatgagagctatcatttcttgttcaaacctataatgggaaaagttatggaagttttt
aaacctggcgctgttgttctccagtgtggtgctgactctctttctggcgataggctagga
tgctttaacctgtcaataaaaggtcatgcagagtgtgttagatatatgagatcattcaat
gtgcctgtattactgcttggtgggggtggctataccatccgtaatgttgctcgctgctgg
tgctatgagacaggagttgcactagggatggaggttgatgacaaaatgccacaacatgaa
tattatgagtattttggccctgattacactctgcatgttgctcccagtaatatggagaac
aagaatacgcaccaaatgttggaagaaatacagggaaagctgcttgaatacctttcaagg
cttcaacatgcacccagtgttcagtttcaagaaagacctcctgatactgaactcccagag
gcagaggaagatcaggaggatagggatgagagatgggatccagactcggatatggaagtt
gacgaagagagaaaacccatcccaagcagggttaaaagagaaacggttgaatctgaaatc
aaagatccggaagttaatcctgagagtgctagaggtttagaaaaggcagcacccgaggct
acaagcgcaaaggctttagatataggttctctcaaaatcgaagagccgggcgtaaaactc
gaagagaccagcaagcagaatgaccaaatgttcccatag
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integrated database retrieval system