KEGG   Benincasa hispida (wax gourd): 120088599
Entry
120088599         CDS       T07258                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03082  ATP-dependent chromatin remodeling
bhj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120088599
   03083 Polycomb repressive complex
    120088599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhj03036]
    120088599
Enzymes [BR:bhj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120088599
Chromosome and associated proteins [BR:bhj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120088599
   HDAC complexes
    Sin3A-HDAC complex
     120088599
    BRAF-HDAC complex
     120088599
    REST complex
     120088599
    SHIP complex
     120088599
    MiDAC complex
     120088599
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120088599
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120088599
  Chromatin remodeling factors
   NuRD complex
    120088599
SSDB
Motif
Pfam: Hist_deacetyl Peripla_BP_7
Other DBs
NCBI-GeneID: 120088599
NCBI-ProteinID: XP_038901934
LinkDB
Position
10:complement(29554764..29559838)
AA seq 492 aa
METGGNSLPSGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VFKPLPARDKVLCRFHADDYVAFLKSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHKVCDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKHYERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPVLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNTHQMLEEIQGKLLEYLSRLQHAPSVQFQERPPDTELPEAEEDQEDRDERWDPDSDMEV
DEERKPIPSRVKRETVESEIKDPEVNPESARGLEKAAPEATSAKALDIGSLKIEEPGVKL
EETSKQNDQMFP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggagacaggaggcaattcattaccatctggacctgatggtgtgaagaggaaggtctgc
tacttctacgaccctgaggttgggaactactattatgggcagggtcacccaatgaagccg
catcgcatcagaatgacgcatgcccttcttgctcattatggcttactccagcatatgcag
gtcttcaagcctcttcctgcgagagacaaagtcctctgcagatttcacgctgatgattat
gtggcgtttcttaaaagcattacccctgaaacgcagcaagaccagctgagacagcttaag
cgcttcaatgtcggtgaggactgtcctgtttttgatggactctattctttctgtcaaact
tatgctggtggatctgttggtggtgccgttaagttaaatcataaggtttgtgatattgct
gttaattggtctggtggactacatcatgcgaagaagtgtgaagcttctgggttttgttat
gtcaatgatattgttttggccatactggagctccttaaacattatgagcgtgttttatat
gtcgacattgatatccaccatggagatggtgttgaagaggctttttatacaactgacagg
gtcatgactgtatcgttccacaaatttggagattatttccctggtacaggagatataaga
gacattggttatgggaaaggaaagtactactcccttaatgttccattggatgatggaatt
gatgatgagagctatcatttcttgttcaaacctataatgggaaaagttatggaagttttt
aaacctggcgctgttgttctccagtgtggtgctgactctctttctggcgataggctagga
tgctttaacctgtcaataaaaggtcatgcagagtgtgttagatatatgagatcattcaat
gtgcctgtattactgcttggtgggggtggctataccatccgtaatgttgctcgctgctgg
tgctatgagacaggagttgcactagggatggaggttgatgacaaaatgccacaacatgaa
tattatgagtattttggccctgattacactctgcatgttgctcccagtaatatggagaac
aagaatacgcaccaaatgttggaagaaatacagggaaagctgcttgaatacctttcaagg
cttcaacatgcacccagtgttcagtttcaagaaagacctcctgatactgaactcccagag
gcagaggaagatcaggaggatagggatgagagatgggatccagactcggatatggaagtt
gacgaagagagaaaacccatcccaagcagggttaaaagagaaacggttgaatctgaaatc
aaagatccggaagttaatcctgagagtgctagaggtttagaaaaggcagcacccgaggct
acaagcgcaaaggctttagatataggttctctcaaaatcgaagagccgggcgtaaaactc
gaagagaccagcaagcagaatgaccaaatgttcccatag

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