Benincasa hispida (wax gourd): 120088707
Help
Entry
120088707 CDS
T07258
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03082
ATP-dependent chromatin remodeling
bhj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120088707
03083 Polycomb repressive complex
120088707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120088707
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120088707
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120088707
HDAC complexes
Sin3A-HDAC complex
120088707
BRAF-HDAC complex
120088707
REST complex
120088707
SHIP complex
120088707
MiDAC complex
120088707
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120088707
Heterochromatin formation proteins
Other heterochromatin formation proteins
120088707
Chromatin remodeling factors
NuRD complex
120088707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
120088707
NCBI-ProteinID:
XP_038902058
LinkDB
All DBs
Position
10:complement(1691635..1699126)
Genome browser
AA seq
430 aa
AA seq
DB search
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRINPDTQHLFANELSKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDGSFTRLFRT
IISKVVEMYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDHLLRIPNGHMENLNTKSYLSTIK
TQVLENLRFIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERMNRHTQDKQIQRDDEYYEGD
NDNDHDMDDA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccaaggataggatttcatacttttatgatggggacgtgggaagtgtttacttt
ggtccaaatcatccaatgaagccacatcggctctgtatgactcatcatcttgttctctca
tatgagcttcataagaagatggaaatttaccgtccccacaaagcatatcctgtggagctt
gctcagttccattcagctgattatgtggaatttctgcaccgaataaatccagatactcaa
cacttgtttgctaatgagctgtctaaatataatcttggagaggattgccctgtctttgag
aacttgtttgaattctgccaaatatatgctggtggaacaatagatgctgcacgcagacta
aatcatcaactgtgtgacattgcaataaattgggcaggtggcttacatcatgctaaaaag
tgcgaggcttctgggttttgctacatcaatgacttggttttggggatactagaacttcta
aaatatcattctcgtgttttatatattgacatagatgtgcatcatggtgatggggtagag
gaagcgttttatttcactgacagggtgatgaccgttagttttcacaagtttggggacttg
ttttttcctggaactggtgatgttaaggaaataggagaaagagaaggcaagttttatgcc
attaatgtcccactgaaggatggaatagatgatggtagcttcaccagacttttcagaact
attatctccaaggttgttgaaatgtatcgaccaggtgtcattgttcttcagtgtggagcc
gattcattggctggagatcgcttaggctgctttaatctctctattgatggtcacgctgaa
tgtgttagatttgtcaagaaattcaatttgccattattggttactggtggtggaggttat
accaaagagaatgtagctagatgttggactgtcgaaacgggagttcttctggatacagag
ctgcctaatgaaattccagacaacgagtatatcaaatatttttcaccagaccatttgcta
agaattccaaatgggcatatggaaaatttaaatacgaaatcataccttagcacgatcaaa
acacaagttttggaaaatctccgtttcatccaacatgctccaggtgtacaaatgcaagag
gttcctcctgatttctacattcctgattttgacgaagatgagcagaatcctgatgagcgc
atgaaccgacacacccaagacaagcaaatccaacgtgacgatgaatattacgaaggagat
aatgataacgatcatgatatggacgatgcatga
DBGET
integrated database retrieval system