KEGG   Benincasa hispida (wax gourd): 120088707
Entry
120088707         CDS       T07258                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03082  ATP-dependent chromatin remodeling
bhj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120088707
   03083 Polycomb repressive complex
    120088707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhj03036]
    120088707
Enzymes [BR:bhj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120088707
Chromosome and associated proteins [BR:bhj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120088707
   HDAC complexes
    Sin3A-HDAC complex
     120088707
    BRAF-HDAC complex
     120088707
    REST complex
     120088707
    SHIP complex
     120088707
    MiDAC complex
     120088707
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120088707
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120088707
  Chromatin remodeling factors
   NuRD complex
    120088707
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120088707
NCBI-ProteinID: XP_038902058
LinkDB
Position
10:complement(1691635..1699126)
AA seq 430 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRINPDTQHLFANELSKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDGSFTRLFRT
IISKVVEMYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDHLLRIPNGHMENLNTKSYLSTIK
TQVLENLRFIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERMNRHTQDKQIQRDDEYYEGD
NDNDHDMDDA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgttccaaggataggatttcatacttttatgatggggacgtgggaagtgtttacttt
ggtccaaatcatccaatgaagccacatcggctctgtatgactcatcatcttgttctctca
tatgagcttcataagaagatggaaatttaccgtccccacaaagcatatcctgtggagctt
gctcagttccattcagctgattatgtggaatttctgcaccgaataaatccagatactcaa
cacttgtttgctaatgagctgtctaaatataatcttggagaggattgccctgtctttgag
aacttgtttgaattctgccaaatatatgctggtggaacaatagatgctgcacgcagacta
aatcatcaactgtgtgacattgcaataaattgggcaggtggcttacatcatgctaaaaag
tgcgaggcttctgggttttgctacatcaatgacttggttttggggatactagaacttcta
aaatatcattctcgtgttttatatattgacatagatgtgcatcatggtgatggggtagag
gaagcgttttatttcactgacagggtgatgaccgttagttttcacaagtttggggacttg
ttttttcctggaactggtgatgttaaggaaataggagaaagagaaggcaagttttatgcc
attaatgtcccactgaaggatggaatagatgatggtagcttcaccagacttttcagaact
attatctccaaggttgttgaaatgtatcgaccaggtgtcattgttcttcagtgtggagcc
gattcattggctggagatcgcttaggctgctttaatctctctattgatggtcacgctgaa
tgtgttagatttgtcaagaaattcaatttgccattattggttactggtggtggaggttat
accaaagagaatgtagctagatgttggactgtcgaaacgggagttcttctggatacagag
ctgcctaatgaaattccagacaacgagtatatcaaatatttttcaccagaccatttgcta
agaattccaaatgggcatatggaaaatttaaatacgaaatcataccttagcacgatcaaa
acacaagttttggaaaatctccgtttcatccaacatgctccaggtgtacaaatgcaagag
gttcctcctgatttctacattcctgattttgacgaagatgagcagaatcctgatgagcgc
atgaaccgacacacccaagacaagcaaatccaacgtgacgatgaatattacgaaggagat
aatgataacgatcatgatatggacgatgcatga

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