Benincasa hispida (wax gourd): 120092939
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Entry
120092939 CDS
T07258
Name
(RefSeq) vacuolar-sorting protein BRO1
KO
K12200
programmed cell death 6-interacting protein
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03250
Viral life cycle - HIV-1
bhj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120092939
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120092939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120092939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120092939
Membrane trafficking [BR:
bhj04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
120092939
Exosome [BR:
bhj04147
]
Exosomal proteins
Proteins found in most exosomes
120092939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
120092939
NCBI-ProteinID:
XP_038907116
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All DBs
Position
12:26296991..26310074
Genome browser
AA seq
884 aa
AA seq
DB search
MAGTASSSSAGTSSNIMLAIFEKKTTQIDLYRPLRNFIAFNYSERDAQNLEDDLQTLKDY
RSDLERQSDPSPTARRDLLQSYFKALCLVETRFPISPDKDHVNTITFVWYDAFKQKQKAS
QQNIHLEKAAVLFNLGAVYSQIGLSFDRATVEGRRQASHAFIAAAGAFAFLRDNASTKAS
IGSSTTVDVSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAA
LNAPPLNQHFDKAWIAHVQLKAAFFLAEACYRYSLELHEKENIAEEIARLRSGINALTEA
KKSTKGAAPQLLDAINKLEANLNRNLERAVKENDRVYLMRVPNPSTLPPLPAFSMVKSMA
MNEVLDASKEKMFSSLIPDSSAKALSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLP
ESILALEGNSSLPTDLKEDVEAVQISGGPIGLEAELQQLRDLRRVNSEMLVQIEELLQKE
AREDSQFRSQFGTRWTRPQSSTLTKNIQDRLNRFAGNLKQAADSDARIERSVKDHSALMS
ILDHRPVESALPTLARPIMSLDANEDAILGTLKQSLRQLENLGAQRAGLEDMLKEMKRKD
DILPKLMTSTGSYEDLFRKEISKYDNICEEISRNIEAQEQLLLQIQGQNNEFSVIFNLED
YKASRERCYKQIQAAVAKYREIKENINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCRE
MMEDVQRQMAGLSFQDSKNSAGGYNNSYPSVGPHAQRSQSPQSDVRPPQSYYQPPHEQPP
VSGYAQPHLQPHPQPHPMYSSPQQPPPSYHSPPAPAPGTSPYPPHPQAPQPPSTNHEYGQ
PAYPGWQGPYYNAHVPQPGAIPRPPYTIPNQYPPHQQGGYYKQQ
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacggcctcatcctcatcggccggcaccagttctaacatcatgctcgccatc
ttcgagaagaaaaccactcaaatcgatctctaccgccctctccgcaacttcatcgccttc
aattactccgagcgcgacgcccagaacctcgaagacgaccttcaaaccctcaaggattac
cgctccgatctcgaacgccagtccgatccctcccccactgcccgccgcgatctccttcaa
agctacttcaaagccctctgcctcgtcgagacccgattccccatttcccccgacaaggac
catgtcaacaccatcaccttcgtctggtatgacgccttcaagcagaagcagaaggcttct
cagcagaatatccacttggagaaggctgcggttctgttcaatttgggtgctgtttacagc
cagattggcctctccttcgatcgcgctactgtcgaggggcgtcgccaggcctcgcacgcg
tttattgcagcagctggggcgttcgccttcttgagagacaatgcgtccaccaaagcgtcg
attggtagctctacgactgtggatgtttcggtcgagtgtgtcggtatgttggagaggttg
atgttagcacaggctcaggagtgtgtctttgagaatacaattgcgaaaggcagtacgcct
ggtgtctgcgcaaaaatctctaggcaggttggtttgtactatgaggaagctttggcagcc
ctcaatgctccaccacttaaccagcattttgacaaggcttggatagctcatgtgcagctg
aaagcagctttctttcttgctgaagcttgctacaggtacagtttagagttgcacgagaaa
gaaaatattgctgaggaaattgctcggttgagaagtgggattaatgctttaactgaggct
aagaagtcaacgaaaggtgctgcgccacagcttcttgatgctatcaacaagttagaggcc
aatcttaaccgtaatttagagagagccgtgaaggaaaatgacagagtctacctcatgagg
gttcctaatcctagtactctgccacctctcccagctttctccatggtgaagtcaatggca
atgaatgaagtgttggacgcgagcaaggaaaagatgttttctagtcttattccagatagc
agtgctaaagctctttctagatacactgaaatggttgacgacattatacgaacacaagct
gagaaattgcaacaagccagtgagctcacccgtgtaaggctcaaggaaatggaccttcca
gaatctattcttgctttggaaggcaattcttccctgccgacagatctaaaagaagatgtt
gaggctgtgcaaattagtggaggcccaataggtttggaggctgagttgcaacaactcagg
gatctaagaagagtaaacagtgaaatgctagtgcagatagaggagctcctgcagaaagaa
gcaagagaggattcccaatttcgaagtcaatttgggactcggtggactaggcctcaatcc
agtacattgacaaagaacatacaagacagattgaatagatttgcaggtaacttgaagcaa
gctgcagacagcgatgccaggattgagcgttcagtgaaagatcattcagctctcatgtca
attcttgatcaccgtccagttgagtctgctctcccaactcttgctaggccgataatgtct
ttggatgccaatgaagatgctattcttgggaccctaaagcagagcttgaggcagttggaa
aatcttggtgctcaacgagctggtcttgaagacatgcttaaagagatgaagaggaaggat
gatatactaccaaagttgatgacatcaactgggtcctatgaggatcttttcaggaaggag
atatccaaatatgacaatatatgtgaggagatttctcgaaacattgaggcccaagaacaa
ttgttattgcagattcagggccaaaacaatgagttttctgtcatctttaatcttgaagac
tacaaagcatcccgtgaaagatgctacaaacaaattcaagctgcagtagccaagtacaga
gaaatcaaggagaacatcaatgagggattaaagttttacgtgactcttcaggatgcaatc
actaatgtgaagcagcaatgtagcgattttgtgatgacaagaaacatccagtgccgtgaa
atgatggaagatgtccaaagacaaatggccggcctcagttttcaagacagtaaaaactca
gctggtggctataacaatagctatccttcagtaggaccccacgcacaacggtctcagtca
ccacaatccgatgttcgcccgccgcaatcttactaccaaccacctcatgagcagccaccc
gttagtggttacgctcagccccatcttcaaccccatccccaaccccatcccatgtacagt
tccccacagcagccacccccttcttaccattcccctcctgctcctgcaccaggtactagt
ccctacccgccgcaccctcaggcgcctcaaccaccttcaacgaaccacgagtatggccaa
ccagcatatccggggtggcaagggccatactacaacgcccatgttccccagcctggagct
attcctcgacctccttacaccatcccgaaccagtatccaccacatcagcaaggtggttac
tacaagcaacaataa
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