Bordetella holmesii ATCC 51541: D560_0144
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Entry
D560_0144 CDS
T03052
Name
(GenBank) putative RNA polymerase sigma factor fecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D560_0144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bho03021
]
D560_0144
Transcription machinery [BR:
bho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D560_0144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_11
Sigma70_ECF
HTH_24
GerE
HTH_3
Phage_terminase
Rv2175c_wHTH
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AHV92314
LinkDB
All DBs
Position
complement(135208..135726)
Genome browser
AA seq
172 aa
AA seq
DB search
MLSPSTLLSDQQLLVRIHTEDRAWLLGRLYTRLRNIEDAEDIAGDTFVQLIQTPRLASVR
EPRALIITIAKRLVWKLWRRRELEAAWLESLFAQGEALAPSPQEQLSALQTLQQVDQILD
GLSFKARAAFLYSQLDGLTHKEIAASLGVSVSMVRQYIAQALARCYALAEST
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgccgtctactcttttatcggaccagcaacttctggttcgcatccataccgaa
gaccgggcctggttgttgggcaggctttatacccggttgcgcaacatcgaggatgctgag
gacatcgccggcgataccttcgtgcaattgattcagacgccgcggctggcttctgtgcgc
gaaccgagggcgctcatcatcacaattgccaagcgcctggtctggaagttgtggcgccgc
cgggaactcgaagccgcctggctcgaaagcctgtttgcgcagggggaggctctcgcgcct
tcccctcaggagcaactcagcgcgctgcagacactgcagcaggtcgaccagattctcgat
ggcttgtccttcaaggcgcgcgcggcctttctgtacagccagctcgatggtttgacgcac
aaggagatcgcggcctcgctgggagtgtcggtaagcatggtgcggcagtacatcgcgcag
gcgctggcgcgctgctatgcgctggcggaatcgacgtga
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integrated database retrieval system
