KEGG   Bordetella holmesii ATCC 51541: D560_0427
Entry
D560_0427         CDS       T03052                                 
Name
(GenBank) helix-turn-helix family protein
Organism
bho  Bordetella holmesii ATCC 51541
SSDB
Motif
Pfam: LZ_Tnp_IS481 HTH_23 HTH_28 HTH_32 HTH_29 HTH_38 HTH_Tnp_ISL3 Sigma70_r4_2 HTH_31 Sigma70_r4 MarR_2 HTH_Crp_2 HTH_IclR HTH_3 HTH_24 Trp_repressor CENP-B_N LacI HTH_17 HTH_11 Xre-like-HTH Fe_dep_repress HTH_Tnp_1 RepB HTH_5 GntR SpoIIID HTH_Tnp_4 HTH_10 HTH_AsnC-type MerR UPF0175 HTH_35 MarR KORA DUF746 HTH_PafC Glyc_hyd_38C_2 Crp HTH_37 Sigma54_DBD HTH_7 TrmB HTH_50 Cro HTH_Tnp_Tc3_2
Other DBs
NCBI-ProteinID: AHV93014
LinkDB
Position
403957..404583
AA seq 208 aa
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADA
SSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEP
AEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIPLRGPAGTSSSWPSMTTPAWP
SPTSTPTSASPAPSSSSRTQWPTTSAWA
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaacacccataagcatgcccgattgaccttcctacgtcgcctcgaaatggtccagcaa
ttgatcgcccatcaagtttgtgtgcctgaagcggcccgcgcctatggggtcaccgcgccg
actgtgcgcaaatggctgggccgctttctggctcagggccaggcgggcttggccgatgcg
tcctcgcgcccgacggtctcgccccgagcgattgcgccggccaaggcgctggctatcgtg
gagctgcgccgcaagcggctgacccaagcgcgcatcgcccaggcgctgggcgtgtcagcc
agcaccgtcagccgcgtcctggcccgcgccggtctgtcgcacctggccgacctggagccg
gccgagccggtggtgcgctacgagcatcaggccccggcgatctgctgcacatcgacatca
agaagctgggacgtatccagcgccctggccaccgggtcacgggcaaccgacgcgataccg
ttgagggggccggctgggacttcgtcttcgtggccatcgatgaccacgcccgcgtggcct
tcaccgacatccaccccgacgagcgcttccccagcgccgtccagttcctcaaggacgcag
tggcctactaccagcgcctgggcgtga

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