Bordetella holmesii ATCC 51541: D560_0427
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Entry
D560_0427 CDS
T03052
Name
(GenBank) helix-turn-helix family protein
Organism
bho
Bordetella holmesii ATCC 51541
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LZ_Tnp_IS481
HTH_23
HTH_28
HTH_32
HTH_29
HTH_38
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_31
Sigma70_r4
MarR_2
HTH_Crp_2
HTH_IclR
HTH_3
HTH_24
Trp_repressor
CENP-B_N
LacI
HTH_17
HTH_11
Xre-like-HTH
Fe_dep_repress
HTH_Tnp_1
RepB
HTH_5
GntR
SpoIIID
HTH_Tnp_4
HTH_10
HTH_AsnC-type
MerR
UPF0175
HTH_35
MarR
KORA
DUF746
HTH_PafC
Glyc_hyd_38C_2
Crp
HTH_37
Sigma54_DBD
HTH_7
TrmB
HTH_50
Cro
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-ProteinID:
AHV93014
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Position
403957..404583
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AA seq
208 aa
AA seq
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MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADA
SSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEP
AEPVVRYEHQAPAICCTSTSRSWDVSSALATGSRATDAIPLRGPAGTSSSWPSMTTPAWP
SPTSTPTSASPAPSSSSRTQWPTTSAWA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccataagcatgcccgattgaccttcctacgtcgcctcgaaatggtccagcaa
ttgatcgcccatcaagtttgtgtgcctgaagcggcccgcgcctatggggtcaccgcgccg
actgtgcgcaaatggctgggccgctttctggctcagggccaggcgggcttggccgatgcg
tcctcgcgcccgacggtctcgccccgagcgattgcgccggccaaggcgctggctatcgtg
gagctgcgccgcaagcggctgacccaagcgcgcatcgcccaggcgctgggcgtgtcagcc
agcaccgtcagccgcgtcctggcccgcgccggtctgtcgcacctggccgacctggagccg
gccgagccggtggtgcgctacgagcatcaggccccggcgatctgctgcacatcgacatca
agaagctgggacgtatccagcgccctggccaccgggtcacgggcaaccgacgcgataccg
ttgagggggccggctgggacttcgtcttcgtggccatcgatgaccacgcccgcgtggcct
tcaccgacatccaccccgacgagcgcttccccagcgccgtccagttcctcaaggacgcag
tggcctactaccagcgcctgggcgtga
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