Bordetella holmesii ATCC 51541: D560_1477
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Entry
D560_1477 CDS
T03052
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding family protein
KO
K03111
single-strand DNA-binding protein
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03030
DNA replication
bho03430
Mismatch repair
bho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D560_1477 (ssb)
03430 Mismatch repair
D560_1477 (ssb)
03440 Homologous recombination
D560_1477 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bho03032
]
D560_1477 (ssb)
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_1477 (ssb)
03029 Mitochondrial biogenesis [BR:
bho03029
]
D560_1477 (ssb)
DNA replication proteins [BR:
bho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D560_1477 (ssb)
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
D560_1477 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
D560_1477 (ssb)
Mitochondrial biogenesis [BR:
bho03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
D560_1477 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHV92720
LinkDB
All DBs
Position
1399235..1399747
Genome browser
AA seq
170 aa
AA seq
DB search
MASVNKVILVGNLGRDPEVRYSPDGAAICNLSLATTSQWKDKASGERREETEWHRVVMYN
RLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEIVADQMQMLGGRDGAEGGGF
GGGGGYDEAPRQQRAPAQRPAPAQRQAPAAAAPMGGGAANLADMDDDIPF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtcaacaaagtcattctcgtcggcaacctggggcgcgaccccgaggtccgc
tatagcccggacggcgcggcaatctgcaatctttctctggctaccacgtcgcagtggaaa
gacaaggcctccggcgagcgccgcgaagaaaccgaatggcatcgcgtcgtcatgtacaac
cgcctggcggaaatcgctggcgagtacctgaagaaaggccgttcggtttatatcgaaggc
cgcctgaagacccgcaagtggcaggacaaggacaccggcgctgaccgctacagcaccgaa
atcgtcgctgaccagatgcagatgctgggcgggcgtgatggtgccgaaggcggcggtttc
ggcggcggtggtggttacgacgaggcgccgcgccagcaacgtgcgcctgcgcaacgcccg
gcaccggctcagcgccaggcgccggccgcagccgcgcccatgggcggcggcgcggccaat
ctggccgatatggacgacgatattcctttttaa
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integrated database retrieval system
