Bordetella holmesii ATCC 51541: D560_3422
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Entry
D560_3422 CDS
T03052
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
bho
Bordetella holmesii ATCC 51541
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GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AHV92945
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Position
3174090..3175520
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AA seq
476 aa
AA seq
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MDPQVKRLAVKVEDHPLDYADFFGDIPAGQYGAGHVDIWDRGHWSMQGNPAQALQRGHLH
FRLQGRRLQGDWALIRTRDEQWLLRKVQDVPPKPAARTLPGKAASMPRQLKPPLATLADQ
PPVGEDWRYEVKYDGYRMLCELRDGNVRFISRNGLDWTARMQPLATTIRALKLGQGWLDG
EVVVFNEQGIADFQLLQKALDGDASCLRYVVFDLPYWEGRDLRGIPLSQRQHWLSVLLER
APSPLRLTQRLDIADAAQAAHAWLQACQLQLEGLIALVQWGVIELHTWNSRAPKTETPDR
LILDLDPGDGVDWPTIVEAAQLVRGLMQEVGLVPFLKSTGGKGLHLVAPLKPVAGWQEVK
ALAHGLADRLESVLPDRFVANMAKAKRGGRIFVDYLRNGKAATAVAAFSVRGRPGGPVAM
PLPWDVLDPARDLRTNCFNVRNALEWIETHPHPWADYAASRRQVGPRMLARLGLRV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcaagtcaagcgcctggcagtcaaggtagaggaccacccgcttgattacgcc
gatttcttcggcgatatccctgccggccagtatggcgcgggtcacgtcgacatctgggac
cgcggccattggtccatgcaaggcaatcccgctcaggcactgcagcgcgggcatttgcat
ttccggctgcaagggcgccgtctgcagggtgactgggcgctcattcgcacacgggacgag
caatggctgctgcgcaaagtccaggatgtgccgcccaaaccagccgctcgtacgctgccc
ggcaaggcggcctccatgcctcggcaattgaaaccgcccctggcaacccttgccgatcag
ccgcctgtcggcgaagactggcgctacgaagtgaagtacgacggttaccgcatgctgtgc
gaattgcgtgatggcaacgtccgcttcatcagccgcaatggcctggactggaccgcacgg
atgcagccgctggccacgacgatccgcgccttgaagctgggccaaggttggttggacggc
gaggtggtggtcttcaacgagcagggcattgccgacttccaactgctgcagaaggcgttg
gatggcgatgcttcatgcctgcgctacgtggtctttgacctgccctattgggaaggcagg
gacctgcgcggcataccgttgtcgcagcgccagcattggctgagcgtcctgctcgaacgt
gcccccagcccgctgcggctgacccagcggctggacatcgccgacgcggcgcaagccgca
cacgcctggctgcaggcctgccagctccagctcgaaggccttatcgcgctggtgcaatgg
ggggtgatcgagcttcatacctggaattcgcgcgcgcccaagaccgagaccccggatcgc
ctcatcctggacctggaccctggcgacggcgtcgactggcccaccattgtggaggccgcg
caattggttcgcggcctcatgcaggaggtcgggctggtgccgtttctgaagtccaccggc
ggcaagggcctgcatctggtcgcgccgctcaagcccgtggccggctggcaagaagtcaag
gcgctggcgcatgggctggctgaccggctggaaagtgtgctgccggatcgcttcgtcgcc
aacatggccaaggccaagcgcggcgggcgcatcttcgtggactacctgcgcaatggcaag
gcagcgacggcggtggccgccttctcggtacgcggccgcccaggcggcccggtcgccatg
cccttgccctgggacgtgctggatccggcccgcgatctgcgcaccaactgcttcaatgtg
cgcaacgccctggaatggatcgagacgcacccccatccatgggccgattacgccgccagc
cgccgccaggtcggcccccgcatgctggctcgccttgggctgcgcgtctaa
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