Bos indicus (zebu cattle): 109553647
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Entry
109553647 CDS
T04792
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109553647 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
biu04990
]
109553647 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
biu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109553647 (LDB3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
109553647
NCBI-ProteinID:
XP_019809231
UniProt:
A0A6P5AXR1
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All DBs
Position
28:41279027..41338902
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AA seq
723 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTAAPPIQSPLPVIPHQKDPALDTNSSLAAA
SPHPEARAGPGTPGTPELGQIFSSSFSQTSVFSSHMEASDPGPPRGGXGAKISLEGALDS
LSPKAPLGSSQPRQYNNPIGLYSAETLREMAQMYQMSRRGKASGAGLLGGSLPIKDLTVD
SASPVYQAVIKNQNKPEDEADDWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSST
PIEHAPVCTSQAATPLLPASAQSPAAASPSTASPPPATAAAHAATASATAPASSPADSPR
PQASTYSPAVATSPAPAAHTYSEAPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGAN
YSPTPYTPSPAPAYTPSPTPAYTPSPAPTYSPSPAPAYTPSPAPSYNPTLYSGGPAESAS
RPPWVTDDSFSQKFAPGKTTTTVSKQSLPRGAPAYTPPPPAPQVSPLARGTVQRAERFPA
SSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKXSLADVCFVEEQNNVYCERCYEQ
FFAPVCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNL
FSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHA
INV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgaccctgacggggcctgggccctggggcttccgcctgcagggcggc
aaggacttcaacatgccgctcaccatctcccggatcacaccaggcagcaaggccgcccag
tcccagctcagccagggtgaccttgtggtggccattgacggcgtcaacacagataccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagtctcacactg
cagaagtcaaagcgtcccattcccatctccacggcagcgcccccgatccagtcccctctg
ccagtgatcccgcaccagaaggaccctgctctggacacgaacagcagcctggcagcagcc
agcccccaccccgaggcgagggccggcccgggcaccccaggcaccccggagctcgggcag
atctttagctcctccttctctcagacctccgtcttctcctcacacatggaggcctctgac
cccggccctccccggggcggcnnnggggccaagatcagcctggagggggccctggactcg
ctcagcccgaaagccccgctgggctcgagccagccaaggcagtataacaaccccattggc
ctgtactcggcagagaccctgagggagatggctcagatgtatcagatgagccgccgaggg
aaggcctcaggtgctggactcctaggagggagccttcctatcaaagacctcaccgtggac
agcgcctctccagtgtatcaggctgtgattaagaaccagaacaagccggaagatgaggct
gatgactgggctcgccgctcctccaacctacagtctcgctccttccgcatcctggcccag
atgacggggacagaatacatgcaagaccctgatgaagaagctttgcgaaggtcaagcacc
cctattgagcatgctccagtgtgcaccagccaggccgccaccccactgctgcccgcttct
gcccagtcgcctgctgctgcctctcccagcacagcctcgccacccccggccacagcygct
gcccatgctgccaccgcctctgccacagcccctgcctcaagccctgcggacagtccaagg
ccccaggcctccacctacagtcctgctgtggccacctctccagcacctgctgcccataca
tacagcgaggccccagctgcccctgcacccaagccccgggttgttaccactgccagcatc
cggccttctgtctaccagccagtgcctgcgtctacctacagcccatccccgggggccaat
tacagtccaaccccctacacgccctcccctgcccctgcctacaccccatcycctacccct
gcgtacaccccttcccctgctcccacctattccccctccccagcaccagcctacaccccc
tcgccagccccaagctataatcctacactgtatagtgggggccctgcagagtctgccagc
cgtcccccatgggtgacagatgacagcttctctcagaagtttgcccctggcaagaccacc
accactgtcagcaagcagagtctgccccgaggcgcccctgcctacaccccgccaccaccg
gctccccaggtgtccccccttgccaggggtacagtgcagagggccgagcgcttcccagcc
agcagccggactccgctctgtggccactgcaacagcatcatccggggcccctttctggta
gccatgggccgttcctggcatccggaagagttcaactgtgcctactgcaagrcctccctg
gcagatgtgtgctttgtagaggagcagaacaacgtttactgtgagcggtgttacgagcag
ttctttgccccagtctgtgccaagtgtaacaccaaaatcatgggggaagtgatgcatgcc
ttgaggcagacatggcataccacctgcttcgtctgtgcrgcctgcaagaagcccttcggg
aacagcctcttccacatggaggatggggagccctactgtgagaaagactacgtcaatctg
ttcagcaccaagtgtcacggctgtgatttccccgtggaggccggcgacaagtttatcgaa
gccctgggccacacctggcatgacacctgcttcatttgcgcggtctgccacgtgaatctg
gaggggcagccattctactccaagaaggacaaacccctgtgcaagaagcatgcacacgcc
atcaacgtgtag
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