Bos indicus (zebu cattle): 109553693
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Entry
109553693 CDS
T04792
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
109553693 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109553693 (JMJD1C)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109553693 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
109553693
NCBI-ProteinID:
XP_019809285
UniProt:
A0A6P5BHV4
LinkDB
All DBs
Position
28:complement(18204339..18532696)
Genome browser
AA seq
2535 aa
AA seq
DB search
MAVETRPELVGKRFLCLALGEEARLERGESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRINPSQTQGSKSKQIQWPALTFKPLVEKS
VPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQTAVPKQNS
HQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKKQVMNKRRKAEEDEKKLN
MKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSKINGEEGKSQNNEKAE
ETLIDSQHPWDQIQEDKKHEETEKQKSVDFQRQEKMIIHSSEQATLXDHNSSDLLLQERN
TEKTHTMELLPKEKFXSRPPTPKCVIDITNDTNTEKVAQETSSSTFGLQTLQKMDPNVSD
SKHSIANTKYLETGNQDSDQNWVSDVVKVDLTQSNVRNASSGNENLSMEKEKNQYVSYLS
SLSAVSVTEDKLHKRSPPPETIKSKLNTSVDAPKTKSNPSPEVVKPKVNHSPDSVKSKAT
YANSQAAGERRPANKIEHELSRCSFHPVPTRGSTLETTKSPLIIDKNEHFTVYRDPALIG
SDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTHP
LTSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQS
PHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSKWVHPENAVNAEPSLRRNSPS
PWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKIAAHSSPPLTKCLVDHHKEELERKA
FIEPLRSVASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETGERLNKYKEEH
RRILQESIDVAPFTTKIKGLECDRDNYSRVASSSSSPKSHVIKQDKDIETDLYKMKHSVP
HSLPQSNYFTTLSNSVVNEPPRSYPSKEISNIYTEKQSNTLATAANPQTLTSFISSLSKP
PPLIKHQPESEGLVGKVPEHLSHQFASHSVTTFRNDCRSPTHLTVSSTNTLRSMPALHRA
PVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQASFKS
SSEQSLTEMWKSNNNLSKEKAEWRVEKSSGKSQAAMASVIVRPPSSTKLDSVPAVQLASK
ERVSERSSLGANQTDCLKPAEAGESGRVILPSVNSDSAHIKSEKNFQAVSQGSVPSSVTS
AVSTVCNTKTDTFTSAATAPGVSSWGGSEIIYSLSNTILASKSLECTSSKSVSHSVAQTQ
ECTVSITAPVTPASSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSETEPNA
AKSQTSSASHLLDSTVVCSTINKADSVGNGQASQTSQPNYHTKLKKAWLTRHSEEDKNTN
KMENSGSSVSEIIKPCSVNLIASTSNDLQNSVDSKIIVDKYVKDDKVNRRKAKRTYESGS
ESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEMEEDLKPNGILSRSAKEKSKLKL
QSNNNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEEP
THSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIETSKYI
LDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGF
VVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLRE
KYGIKSHCHCTNKQNIQVGNFSPMNGVSQVLQNVLNHSNKISLCMPESQQQSTPQKPESN
GSSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEKQIKEEREQDDP
DSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGKSGRTM
PNILDDIIASVVENKIPPNKASKINVKSEFKEEPKESRKSAMDENNKLYSDIPHSWICEK
HILWLKDYKNTNNWKLFKECWKYGQPAVVSGVHKKMNISLWKADSISLDFGDHQADLLNC
KDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYEDLLKSL
PLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVSDVVNI
LVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREF
LQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTLVQFLGDAIVLPAGAL
HQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVR
ALKIHEDEVEAMEEN
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctttgcctggcgctcggc
gaagaggcgcggctggagcgcggggagagcggacgctgctggcggggctggcgagcgggg
gttatccgagcggtgtcacacagggacagccgcaatcccgacctggcggtgtatgtggaa
tttgatgatcttgagtgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggatcaaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacccctggttgaaaaaagt
gtacccagttcaatcactgcagtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttactccttgaatggatacagagtgagagtatatagacaagac
tctgccacccagtggttcactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgaaggtctcgtgccagtcaaaatagcaacactgttcacggtcattatacacgtgcc
caagcaaatagtcccagaccagcaatgaactcccaaactgctgtaccaaaacagaattca
caccagcaacaaagaaatattcgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaaatatgattatatagcacgaggagaaaatcctaaa
ggtaaaaaacaggtgatgaacaaaagaaggaaagctgaggaggatgaaaagaaactaaat
atgaaaagactgcgaaccgacaatgtttcagacttttctgagagtagtgactcagaaaat
tcaaataagagaataataaataattcctcagagcagaagccagagaatgagttgaaaaat
aaaaacacttcaaagataaacggagaagaaggaaaatctcagaataatgagaaggcagaa
gagacactaatagatagccagcatccctgggatcaaatacaggaagataaaaaacatgaa
gaaacagagaaacagaaatctgttgactttcagcgtcaagaaaaaatgattatccattca
tcagaacaggccacacttkctgatcataattctagtgatttacttcttcaggaacgtaat
acagagaagacacacacaatggaattattaccaaaggagaagtttktatccagaccgccc
actccgaaatgtgttattgatattacaaatgacactaacacagaaaaggtggctcaggaa
acctcaagtagtacctttggccttcaaacacttcagaaaatggatcctaatgttagtgat
tcaaaacattcaattgcaaatacaaaatacttggaaacaggaaaccaagattctgaccag
aactgggtcagtgatgtagttaaagtagatttaacccaatcaaatgtaaggaatgcttct
tcaggaaatgaaaacttgagtatggaaaaagagaaaaatcagtatgtctcttacttatct
tctctaagtgctgtttctgtcacagaagataagctgcataagcgaagtccacctccagaa
actataaaatctaaacttaatacttcagtagatgctcccaagacaaaatccaatccctcg
cctgaagttgttaagcctaaagtcaaccattcccctgattctgtaaagtctaaagccact
tatgcgaacagccaagctgctggtgaaagaagaccagcaaataagatagaacatgagtta
tcaagatgcagttttcacccggttcctactagaggcagtacattagaaactacaaaaagc
cctctaatcattgataaaaatgaacattttacagtttacagagatcctgcacttattggg
tcagatacaggagctaaccacatttcacctttcttaagccagcatccttttcctcttcat
tcttcatcccatagaacatgtttaaatccaggtacccatcatcctgccttaactcctgca
ccccacttactggctggatcatccagtcaaactccattacctaccattaacactcaccct
ctgactagtggtccacaccattctgttcatcaccctcatttacttcctactgtgttaccc
ggagtgcctactgcctccttacttggtggccacccacgactagagactgctcatgccagc
agcttgagccacttagcattagcacaccagcaacagcaacagttgttacagcaccagtca
cctcatctccttggacaagcccatccatctgcttcatataatcagcttggactttatcca
attatttggcaatatccaaatggaacacatgcatactcaggacttggtctgccttctaag
tgggttcacccagaaaatgcggttaatgctgaaccttcattaaggaggaattctcccagt
ccttggttacatcagcctacccctgtgacctcagcagatggtattggattacttagtcac
attcctgtcagaccttccagtgcagaacctcatcggcctcttaaaatcgcagcacattcc
agtccgccactgacaaaatgtttagtagatcaccataaagaagaattggagaggaaagct
ttcattgaaccactgcgttctgttgcatccacatcagccaaaaatgacctggatctaaac
aggtcacagactggaaaagatggtcacttgcataggcattttgtggatcctgtattgaat
caattacagagaccaccccaggaaactggagagagattaaacaaatataaggaggaacac
cgtcgaattcttcaagaaagtattgatgttgctccctttacgactaaaatcaarggtctt
gagtgtgatagagataattattccagagtagcatcgtcatcttctagccctaagagccat
gtcatcaaacaagacaaggatatagaaacagatctttataaaatgaagcactcagtgcct
cacagtttgcctcaaagtaactatttcactacattgtctaatagtgtagtcaatgaacca
ccaaggtcatacccatccaaagagatttcaaatatttacactgaaaaacagagtaatacc
cttgcaacagcagctaatcctcaaactctgacttcatttatatcatctctttcaaagcct
ccacctttgataaaacatcagccagaaagtgaaggtttagtaggcaaggtaccagaacat
ctttcccatcaatttgcttctcactcagtaacaactttcagaaatgactgtaggagtcct
actcatttgacagtttcttctacaaatacactccggagtatgcctgctttacatagagca
ccagtatttcacccgccgatccatcatagcctggaaagaaaggaaagcagctatagtagc
ctttcccctccaacgttaactccagtgatgcctgtaaatgctggtgggaaagttcaggaa
tcacaaaagcctcccacactgattcctgagccaaaagatactcaggcaagttttaagagt
tcttctgaacagagtttgacagaaatgtggaaatctaataataacctcagcaaagagaaa
gctgaatggcgtgtagagaaaagcagcggaaagtcccaggctgccatggcgtctgtcatc
gtgcgtccaccttcaagtacgaaactcgacagcgtgccagcagtacagttagcttccaaa
gagcgagttagtgaaagatcttcacttggggcaaatcaaacagattgcctcaaaccagca
gaagctggagagagtggaagagtcattctgccaagtgtgaattcagacagtgctcacata
aaatccgaaaaaaactttcaggctgtctcacagggcagtgttcccagttcagtcacgtct
gctgtaagtacagtgtgtaataccaaaacggatacattcacatctgctgccactgccccc
ggtgtttccagctggggtggttcagaaataatttactcattatcaaataccattttggcc
tctaaatccttagaatgtacctcttcaaaaagcgtcagtcattcagtggctcaaacacaa
gaatgcacggtcagcatcacagctccagttacaccagccagcagtaagacaggaagtgct
gttcagcccagctctgggttttcaggcacaactgattttattcatttaaagaagcacaag
gcagcgttggccgcagctcaatataaaagtagtaatgtcagtgagactgagcctaatgct
gcgaaaagtcagacgtcttcagcctcccatctcttagatagcactgtagtctgtagtaca
ataaacaaagcagactctgtaggaaatgggcaagcatcccagacaagtcaaccaaactac
catactaaactgaaaaaagcctggcttacgagacattcagaagaagataaaaatactaat
aaaatggaaaattcagggagttctgtatcagaaattattaagccatgttctgtcaattta
atagcctctacatctaatgatctacaaaatagtgtagatagtaagatcatagttgataaa
tatgtaaaagatgataaagtaaatagaagaaaagccaaacgaacttatgaatctggctcc
gaaagtggagattcggacgaaagtgaragcaaatcagagcaaaggactaaaaggcaacct
aagccaacttacaaaaagaagcaaaatgatcttcaaaagagaaaaggtgaaatggaagaa
gatttaaaacccaatgggattctcagcaggagtgccaaagaaaaaagtaaattgaagttg
cagagcaacaataatagtgctggcatccctcgttcagtattgaaagattggcgtaaagtc
aagaagctgaagcaaactggggaatcctttttacaggatgactcctgctgtgagataggg
cctaatttgcaaaagtgccgagaatgtagacttattcggagtaaaaagggagaagaacca
actcactcaccagtgttttgtagattttactactttagacgattgtcatttagtaaaaat
ggagtggttagaatagatggtttctcttctcctgaccagtatgatgatgaagctatgagt
ttatggacacatgaaaattatgaagatgatgaactagacatagaaacatcaaaatacatc
ttggacataataggtgataagttctgtcagttggtaacatctgaaaaaacagctttgtcc
tgggtgaaaaaggatgccaaaattgcctggaaaagagcagtgaggggagtccgggagatg
tgtgatgcatgtgaagcaacattgttcaacattcactgggtctgccaaaaatgtggattt
gtggtctgcttagattgttacaaggcaaaggaaaggaagagttctagagataaagaattg
tatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaacatttgatgccaact
caaattattcctggttctgttttgacagatcttttggatgcgatgcacactcttagagaa
aaatatggtattaaatcccattgtcattgtactaacaaacagaatatacaagttggaaat
ttttctcctatgaatggtgtgtctcaagttttacagaatgttcttaatcacagtaataaa
atttctctgtgcatgcctgagtctcagcagcaaagtacccctcagaagcccgaaagtaat
ggcagcagcagtccagggagtgatgtgagcacagacagcaagttaactcctccagaatcc
cagtcacccctgcactggttagcagatcttgcagagcaaaaggccagagaggaaaaaaaa
gaaaacaaagaatttgcccttgaaaagcaaataaaagaagagagagaacaagatgatcct
gattctccaaatagtagaacatcacctcctgtatcccaaaataatgagcaaggttcaaca
ttacgagatttgctgaccacaaccgctggcaagctacgcgtggggtctacagatgctggc
attgcctttgcaccggtttattcaatgggaacccccagtggtaaaagtggaaggactatg
ccaaacattcttgatgacataattgcttcagttgttgaaaacaaaattccaccraataaa
gcctctaagataaatgtaaaatcagagttcaaagaagaacccaaagaaagcagaaaatct
gccatggatgaaaacaataaattgtacagtgatataccacattcttggatctgtgagaag
catattctgtggcttaargattataaaaatactaataattggaagcttttcaaagagtgt
tggaaatatggacaacctgcagtggtttctggcgtgcataagaaaatgaacattagcttg
tggaaggcggactcaattagtcttgattttggagaccaccaagctgatctcctcaactgc
aaagacagcattatttcaaatgccaatgttaaggaattctgggatggttttgaggaagtt
tcaaaacggcaaaaaacaaaaagtggagaaacagttgttttaaaattgaaagactgccct
tcaggagaagacttcaagactatgatgccagcaagatatgaagatcttttaaaaagcctg
ccgttgccagaatattgtaatccagaaggaaagttcaacctggcctctcacttaccggga
ttttttgtgcgccctgatctaggacccaggttgtgcagcgcttatggtgtagctgctgct
aaagatcatgatataggaacaacaaatctacatgttgaagtttctgatgttgtaaatatt
ctagtctatgttggcatagcaaaaggaaatggcattctctcaaaagcaggaatactcaag
aaatttgaggaagaagatttggatgacattttaagaaaacgattgaaggactcaagtgaa
atacccggtgctctgtggcatatttatgctgggaaagatgttgacaagatacgggaattt
cttcagaagatttcaaaagaacaaggccttgaagttctaccagaacatgatccaatacgt
gaccagagttggtatgtgaacaaaaagcttcgtcaaagactgcttgaggaatatggagtc
aaaacctgcactctggttcagttcctcggtgatgccattgtcttaccagcaggagcactt
catcaggtacagaattttcacagctgtattcaggtaaccgaagactttgtgtctccagaa
catctcgtacagtcatttcatttaacacaggaactgagacttttgaaggaagaaatcaat
tatgatgataaactacaggttaaaaatatcttgtatcatgcagtcaaggaaatggtgaga
gctttgaagatacatgaagatgaagtagaggctatggaagaaaattag
DBGET
integrated database retrieval system
