Bos indicus (zebu cattle): 109555197
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Entry
109555197 CDS
T04792
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu04820
Cytoskeleton in muscle cells
biu04926
Relaxin signaling pathway
biu04933
AGE-RAGE signaling pathway in diabetic complications
biu04974
Protein digestion and absorption
biu05146
Amoebiasis
biu05165
Human papillomavirus infection
biu05200
Pathways in cancer
biu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109555197 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109555197 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109555197 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109555197 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
109555197 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
109555197 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109555197 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
109555197 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109555197 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
109555197 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109555197 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109555197 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109555197 (COL4A6)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109555197 (COL4A6)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109555197 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109555197
NCBI-ProteinID:
XP_019811402
UniProt:
A0A6P5BF72
LinkDB
All DBs
Position
X:complement(34541013..34890461)
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AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGPPGLPGQKGSKGEPVLAQGSFKGMKGEXGLPGLD
GITGPQGAPGSPGAVGPRGPSGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGVSGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGPQGALGLKGERGNTGRTTTGAA
GLPGRDGLPGLPGLPGPPGAASETGTLQSTEPGSPGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGIFGPRGPTGPKG
KKGDPTLSTRSGMPGEQGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGDCCCKEEVGKT
DLDTEGGITLPCIIPGPYGPSGLPGAPGFPGPKGARGLPGAPGQPGLRGXKGDPGSPGLV
HLPELPGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGDILGAENGAPGEQG
LQGLPGDRGFPGDSGLPGLKGLLGKSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGLPGPIGFLGNSGLPG
ATGLPGLPGLKGEKGSVGLTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKG
DRGDPGPFGIPSHRPPMLNLRFKGDKGSQGSPGAIGFPGPRGDKGEAGHPGPPGLPGAPG
FPSLIKGLSGRPGPPGSTGLRGLPGLKGYPGIAGFQGIPGESGSQGLSGVPGLPGASGLP
GLKGDQGQTLGISGSPGPKGQPGESGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGL
PGSLGLPGVAGMRGNPGLPGSPGHPGATGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGAAGLPGA
LGLSLPSVIEGQPGDPGRPGLDGERGRPGPPGPPGPPGPASDQGDPGDPGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGA
PGHTPIAEAIQAPPGPMGLPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGASGLPG
PPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPVSETLKAGQLHTRVSRCQVCMKSV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttaaaaggagaaaggggc
tccccaggcccgctgggaccgtatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattctgggcttcctggaccacctgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgcccaaggtagtttcaaaggaatgaagggggagyctgggctgcccggactggat
ggaatcactggcccacaaggagcacccggatctccaggagctgtaggacccagaggacca
tcaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggagtaagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggacctaggggt
cccatgggtttagaaggagtccaaggccctccggggagtcagggcaggaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggcgcccctggattaccagctttaccaggtggccccggtgctctggggccccag
ggagctctaggcctgaagggggaacgaggaaacactggccggaccacaacgggggcagct
ggtctccctggcagagatggtttgccaggcctgccaggcctaccaggcccacctggtgca
gcatctgagacgggaaccctacagagcacagaaccgggatcgccgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtatatttgggcctcgaggtccaacaggccctaaagga
aagaaaggggacccaactctcagcacaagatcagggatgccaggagagcaaggtgatcct
ggcccccaggggctccctggtgagacaggagccccaggcaaggatggaataccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacactggtccaactggccccccaggaattgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcaaggaggaggttgggaaaaca
gacttagacacagagggaggtatcaccttgccttgtattattcctggaccgtatggtcca
tcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaawaaaggggaccccggaagtccaggattggtt
cacctgcctgaattgccagggtttcctggacctcatggagagaagggcttacctgggttt
cctgggctccctggaaaagacggcttgcctgggaaagttggcagccccggcttaccaggt
cccaagggagcccctggtgacatccttggtgctgaaaatggtgctccgggggagcaaggc
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgtgtgggtcagccaggacccccaggccctagtggtctatttggcatcaagggc
aaacccgggctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcctgggctg
aaagggcttccgggactgccagggccaattggcttcctggggaactcaggcttgccaggg
gccactgggttaccaggcctgccaggtctgaagggtgagaaggggtctgttggactgaca
ggttttccagggattccaggtctccctggtattcctggagcaagtggattaaagggaatt
cctgggtcgacaggaagagtggggccatctggatgggctggtagccctggtgaaaaagga
gacagaggtgacccaggcccctttgggatacccagtcatcgacctccaatgctgaacctc
cgcttcaaaggagacaaaggttctcagggctcacctggagccattggatttcctggaccc
agaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagctcctggc
ttccccagcctcatcaagggacttagtgggagaccaggcccccctggctccacaggacta
cggggcttacctggcctgaaggggtaccctggaattgcaggtttccaaggaattccagga
gaaagtggttcacagggtctcagtggagttcccgggctaccaggagcatctggtctccca
ggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggacccaaggga
caacctggggagtctggtttcaaaggtgtgaaaggaaaagacggaccagttggtgatgtg
ggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgttggcctt
cctggctccctaggactccccggagttgcaggcatgagaggaaatccagggcttccaggt
tctccaggccacccaggggcaactgggcccctgggtccccctggcctaataggaaccaaa
ggtttccctggacttccaggtttacatggactgaatgggcttccaggaaccaaggggact
catggaactccaggacctagtataaccggtgtgcctgggccagctggcttgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccaggmaagccaggtataaga
ggacccaaaggtagtcaaggttttccaggtctccagggcgccgctggtctccccggtgca
ctgggcctctccttgccttcagtcatagaaggacagcctggtgaccctgggcgaccaggt
ctagatggagaacgaggccgcccaggccctcctgggcccccaggcccccctgggcctgcc
tcagatcaaggcgaccctggagaccctggcttccctggaattcctggccctcaagggccc
aaaggagaccaaggaattccaggtttctctggcctccctggagagctaggattgaaaggc
atgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctggagaccca
ggacttcccgggatgaaggggaaggcggggccaagaggcttatctggccctcgaggtgct
cctggacacacacccattgcagaagccatccaggctccccctggacccatgggtcttcca
ggcattgatggaatccctggcctcatgggagaccctggggtccaaggacctgtgggccta
caaggatctaaaggtttacctggcatccctggcaaagatggcgccagtggactccctggc
ccacctggggctcttggtgatcctggtctccctggactacaaggccctccaggatttgaa
ggagctccagggaagccgggccccttcgggagggctggagtgcctggacagagcctgaga
gtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgccccagcggg
atgagccagctctgggtgggttacagcctgctgttcgtggaggggcaagagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tactgcaacatcaatgaagtgtgccactatgcccgacggaatgataagtcctactggctc
tccaccaccgcccccatccctatgatgccggtcggccagacacagatcccccagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccattgctgtgcacagccaggacatc
accatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttcctcatg
cacacagccgccggtgcagagggcgggggccagtccctggtctctcccggatcctgccta
gaggatttccgggctactcctttcatcgaatgcagtggtgcccggggcacctgccactac
tttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagtttggggag
gagcctgtatctgagacgctgaaagctggacagctccacacccgagtcagccgctgccag
gtgtgtatgaaaagcgtgtag
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