KEGG   Bos indicus (zebu cattle): 109556399
Entry
109556399         CDS       T04792                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:biu03036]
    109556399 (KDM4A)
Enzymes [BR:biu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     109556399 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     109556399 (KDM4A)
Chromosome and associated proteins [BR:biu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109556399 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 53-BP1_Tudor LBR_tudor Tox-REase-7 DUF4537
Other DBs
NCBI-GeneID: 109556399
NCBI-ProteinID: XP_019813211
UniProt: A0A6P5B3X5
LinkDB
Position
3:complement(109261684..109302158)
AA seq 1066 aa
MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKESELA
LRARKEEDCPEEEETEGVEDGEEGDLKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEE
LGSGQYDMAECQAALSPVRPTHSSVRQVEDSLTFPDYSDSTEVKFEELKNVKLEEDDEDE
EEEHEAAVLDLSVNPASLGRLVFSGSKXKSSSSLGSGSSQDSVSSDSETSEPLSCRAQGQ
TGVLTVHSYARGDGRVLPGEPCARKKGGATRSISERELAEVADEYMFSLEESKKSKGRRQ
PLSKLPRHHPLVLQDCVSDDELPEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFN
EAMAQQAPHCAVCMIFQTYHQVEFGGFGQSCGSAPDLAPQTQRTKPLIPEMCFTSTGCST
DINLSTPYLEEDGTSLLVSCKKCSVRVHASCYGVPPAKASEDWMCSRCSANALEEDCCLC
SLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRK
RTAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQS
ITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPA
EGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRL
SVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggcttctgaatctgaaaccttgaatcccagtgctcggatcatgaccttctacccgact
atggaggagttccgaaacttcagtcgttacattgcttatattgaatcccaaggagctcat
cgggctgggctggctaaggttgttcctccaaaggagtggaagccacgagcctcctatgat
gatatcgatgacctggttattcctgcccccatccagcagctggtgacggggcagtctggc
ctctttactcagtacaacatacagaagaaggccatgactgtgcgagagttccgcaagata
gccaacagtgataagtactgtaccccacgctatagtgaatttgaagagcttgaacggaaa
tactggaaaaatctcacgttcaatcccccaatctatggtgcagatgtgaatggcactctc
tatgaaaagcatgtagatgagtggaatattggccggctgagaaccatcctggacttggtg
gaaaaggagagtgggatcaccatcgagggtgtgaacaccccgtacctgtacttcggcatg
tggaagacatcctttgcctggcacaccgaagacatggacttgtacagcatcaattacctg
cacttcggagagcccaagtcctggtactccgtcccgcccgagcacggaaagcggctggag
cgcctggccaaaggctttttcccaggcagtgctcaaagctgtgaggcttttctccgccat
aagatgaccttgatttctcctttaatgctgaagaaatacggaattccctttgacaaggtg
actcaggaagcyggagaatttatgatcactttcccttacggctaccatgctggctttaac
catggcttcaactgtgccgaatccaccaactttgctacccgrcggtggatcgagtatggc
aaacaagctgtgctgtgctcctgcaggaaggacatggtgaagatctccatggacgtgttt
gtgaggaagttccagccagaaagatacaagctctggaaagctgggaaggacagcaccgtc
atcgaccacactctgcccacaccagaagcagcygagtttcttaaggagagtgaactggcc
ctgagagcccggaaggaggaggaytgcccagaggaggaggagacggagggggtggaggat
ggagaggagggcgacctgaagaggagcctggccaagcaccggatcgggacaaagaggcac
cgcgtttgtcttgaaatcccrcaggaggtgagtcagagcgagctcttccccaaggaggag
ctgggctccggacagtacgacatggcggagtgccaggccgccctctctcccgtgaggccc
acccacagctccgtgcgccaagtcgaggacagcctcaccttcccagattattctgactcc
actgaagttaaatttgaagarcttaaaaacgtcaagctggaagaggacgacgaggacgag
gaagaggagcatgaagcagctgtcttggacctttctgtgaacccagcttctcttggacgc
ctcgtcttctcaggctccaaaragaaatcgtcttccagcctgggctccggttcttcacag
gattctgtttcttccgattctgaaaccagygagcctctgtcctgccgagcccaagggcag
accggagtcctcactgtgcacagctatgccagaggggatggcagggtccttccaggagag
ccgtgcgccaggaagaaagggggcgccacccggagcatcagtgagagggaattggccgag
gttgcggatgaatatatgttttccctggaagagagtaagaagtccaagggccgccgtcag
cccttaagcaagctcccccgccaccacccgctcgtgttgcaggactgcgtcagcgatgat
gagctaccagaacagctgacccccgaggaggaggctgaggagacagaggcctgggccaag
cccctgagccagctctggcagaaccgacctccaaattttgaggctgagaaagagttcaac
gaggccatggcccagcaggcccctcattgcgctgtctgcatgatctttcagacttaccat
caggtggagtttggaggttttggtcagagctgtggcagcgctccagatttggccccccag
acgcagaggaccaagccattgattccagaaatgtgcttcacctcgactggctgcagcacg
gacatcaacctgtccaccccttacctggaggaggacggcaccagcctcctggtgtcctgc
aagaagtgcagcgtccgggtccacgccagttgctacggggtaccccctgcaaaggcttct
gaagactggatgtgttctcggtgttcagccaatgccctggaagaggactgctgtttgtgc
tcattacgaggaggagccctgcagagagccaacgatgacagatgggtccatgtctcatgt
gcggtggcgattctggaagcaagatttgtcaacattgcagaaagaagtccagtggatgtg
agcaaaattcccctgccccgcttcaaactgaaatgtgtcttctgtaagaaacggaggaaa
agaactgccggctgctgtgtgcagtgttctcacggccgttgcccaactgccttccacgtg
agctgcgctcaggctgcaggcgtgatgatgcagccagacgactggcctttcgttgtcttc
atcacctgcttccggcacaagatccctaatttggagcgtgccaagggggccttgcagagc
atcaccgcaggccagaaggtcattagcaagcataagaaygggcgcttctaccagtgtgag
gtggtaaggctcaccactgagaccttctacgaagtcaactttgatgacggctccttcagc
gacaatctctatcctgaggacatagtgagtcaggactgtctccagctgggtcctcctgct
gaaggggaagtagtccaggtgagatggacagacggccaagtctatggagccaagtttgtg
gcctcccaccccatccagatgtaccaggtggagtttgaggatggctcacagcttgtggtt
aaaagagatgacgtgtacacgctggatgaagagcttcccaagagagtcaagtctagactg
tcagtagcctcagacatgcgcttcaatgagattttcacggagaaagaggttaagcaggag
aagaaacggcaacgagttatcaactcaaggtaccgggaagattacatcgagcctgcacta
taccgggccatcatggagtag

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