Bos indicus (zebu cattle): 109558323
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Entry
109558323 CDS
T04792
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu05165
Human papillomavirus infection
biu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109558323 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
109558323 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109558323 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109558323 (CHD4)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109558323 (CHD4)
Chromatin remodeling factors
NuRD complex
109558323 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
109558323
NCBI-ProteinID:
XP_019815335
UniProt:
A0A6P5BRV9
LinkDB
All DBs
Position
5:10812326..10841743
Genome browser
AA seq
2021 aa
AA seq
DB search
MGGGAPSSRPRPTRVSLSATPTLYSASHNARRPPRPQLTCPPGHVARPPARRREAPPPPP
SDLVSPSASPPAAFPGPHPAPRTAATRTPSPVTPGSVQRPLPSPRRHRPALGGAALSGGL
QSGNRLPGRPRECGTKFSLSGSENEEDPEEDLSEAETPKLKKKKKPKKPRDPKIPKSKRQ
KKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSK
RKEEEEEDEDDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAA
KNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTATEVAPPPP
PVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGGFGSKRKRSSSE
DDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQD
YCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGE
EILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCP
RCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMS
YWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPKFAEMEER
FYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQSY
WNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQM
EGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWE
REFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTS
YELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEE
LFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTE
LIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAME
APKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGY
KYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPH
NDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMS
KQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQ
GMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLAR
NLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKG
LRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGK
SEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEH
VNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKVEENNL
KEEESAEAEKEVKSVPPEAAVECTQPPAPASEEEKVPVEPPEGEEKVEKAEVKERTEEAM
ETDPKGNADVEKVEEKAAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQKKN
IKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQD
IQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEXLRRAAYLNMSEDP
SHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRL
PATIARIPPVAVRLQMSERNILSRLANRAPEPPPQQVAQQQ
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgggggggggtgcgcccagctcccgccctcgcccgacccgagtctcgctctcagcgact
cccaccttgtactcggcctcccacaatgcccggcgcccccctcgccctcagctcacttgc
cccccgggacacgtggctcggccccctgcccggcgcagggaggcgccccccccaccccca
agtgaccttgtgtccccgagcgcctcgccgccggccgccttccccggcccccaccccgca
ccccgcaccgcggccactcggaccccctcccccgtcacgcccggctccgtccagcggcct
ctcccctccccacgccggcaccggcctgccctcgggggcgccgctctctccggggggctc
cagtcggggaaccggcttccgggccgcccccgggagtgtggaactaagttcagcctgagt
ggttcrgaaaacgaagaagacccagaagaggacttgtcagaagcagagactccaaagctc
aagaagaagaaaaagcctaagaaacctcgggaccctaaaatccctaagagcaagcgccaa
aaaaaggagcgtttgctcttatgccggcagctgggggacagctctggggaggggccggag
tttgtggaggaggaggaagaggtggccctgcgctcagacagcgaaggcagcgactatacc
cctggtaagaagaagaagaagaagctgggccctaagaaggagaagaagagtaaatccaag
cggaaagaggaggaggaggaggacgaggatgatgatgactcaaaggagcctaagtcatca
gctcagctcttggaagactggggcatggaagacatcgaccatgtgttctctgaggaggat
tatcgcaccctcaccaactacaaggccttcagccagtttgttagacccctcattgctgcc
aaaaaccccaagatcgccgtctccaagatgatgatggttttgggtgcgaagtggcgggaa
ttcagcaccaacaatcccttcaaaggcagttctggggcttctgtggcagcagctgcagcg
gcggcagtggccgtggttgagagcatggtgacggccactgaagtggcaccgcctccaccc
cctgtggaggtgcctatccgcaaggccaagaccaaggagggcaaaggtcccaatgctcgg
aggaagcccaagggcagtcctcgtgtccccgatgccaagaagcctaaacccaagaaagta
gctcccctgaaaatcaagctgggaggtttcggttctaagcgaaagagatcctcgagtgag
gacgatgacttagatgtggagtctgacttcgacgacgccagtatcaatagctattctgtt
tctgatggttctaccagccgcagtagccgcagtcgcaagaaactgcggaccacaaaaaag
aagaagaaaggcgaggaggaggtgactgctgtggatggttatgagacagaccaccaggac
tactgtgaggtgtgccagcaaggcggagagatcatcctgtgtgacacgtgtccccgcgca
taccacatggtctgcctggacccggacatggagaaggcacccgagggcaagtggagctgc
ccacactgcgagaaggaaggcatccagtgggaggcaaaggaggacaattcggagggcgag
gagatcctggaagaggttgggggagaccctgaggaagaggatgatcaccacatggagttc
tgtcgggtctgcaaggatggcggggagctgctctgctgtgacacctgtccctcctcctac
cacatccactgcctgaacccccccctcccagagatccccaacggcgaatggctgtgtccc
cgctgcacgtgtccagctctcaagggcaaagttcagaagatcctaatctggaagtggggt
cagccaccatctcccacgccagtgcctcggcccccagatgctgatcccaacactccgtcc
cccaagcccttggaggggcggccggagcggcagttcttcgtcaagtggcaagggatgtcg
tactggcactgctcctgggtgtctgagctgcagttggagctacactgtcaagtgatgttc
cgaaactatcagcgcaagaatgacatggatgaaccaccctctggggacttcggtggtgac
gaggagaagagtcggaagcggaagaacaaggaccctaaattcgctgagatggaggagcgc
ttctatcgctatgggataaagcccgagtggatgatgatccaccgaattctcaaccacagc
gtggacaagaagggccacgtccactacttgatcaagtggcgggacctaccctatgaccag
gcatcctgggagagtgaggatgtggagattcaggactatgacctgttcaagcagagctac
tggaatcacagggagttgatgaggggtgaggagggacgaccaggcaagaagctcaagaag
gtgaagctgaggaagttggagaggccccctgaaaccccaacggttgatccaacagtgaag
tatgagcgccagccagagtacctggatgctacgggtgggaccctgcacccctatcagatg
gaaggcctgaactggctacgcttctcctgggctcagggcactgacaccatcttggccgac
gagatgggccttgggaagacggtgcagactgcagtcttcctgtactccctctataaggag
ggtcattccaaaggccccttcctagtgagcgcccctctttctaccatcatcaattgggag
cgggagtttgaaatgtgggctccagatatgtacgtggtgacctacgtgggtgacaaagac
agccgtgctatcatccgagagaatgagttctcctttgaggacaatgccattcgtggcggc
aagaaggcttcccgcatgaagaaagaggcatctgtgaagtttcatgtgctgctgacatcc
tatgagttgatcaccattgacatggccatcttgggctctattgactgggcctgcctcatc
gtggatgaagcccatcggctcaagaacaatcagtctaagtttttccgggttctaaatggc
tactcactccagcacaagctgttgctgacagggactccactgcagaacaatctagaagag
ttgttccacctgctcaacttcctcacccctgagaggttccacaatttggaaggcttcctg
gaggagtttgcggacattgccaaggaggaccagattaaaaagctgcatgacatgctgggc
cctcacatgttgcggcggctcaaggctgacgtgttcaagaacatgccgtccaagacagag
ctgatcgtgcgtgtggagttgagccccatgcagaagaaatactacaagtacatcctcact
cggaattttgaagccctcaatgcccgagggggtggcaaccaggtctctctgctgaatgtg
gtgatggatcttaagaagtgctgcaaccacccatatctcttcccggtggccgccatggaa
gcccctaagatgcctaacggcatgtatgacggcagtgccctcatcagagcatccgggaaa
ttattgctgcttcagaagatgctcaagaacctcaaggagggtgggcaccgtgtcctcatc
ttctcccagatgaccaagatgctggacctgctagaggacttcctggaacacgaaggttat
aaatatgaacgtattgatgggggaatcactgggaacatgcgtcaggaggccattgaccgc
ttcaatgcaccaggtgctcagcagttttgcttcctgctttccactcgagctgggggcctt
ggaatcaatctggctactgctgacacagttattatctacgactctgattggaacccccat
aatgacatccaggcctttagcagagctcaccgtattgggcaaaataagaaggtgatgatt
taccggtttgtgacccgtgcgtctgtggaagagcgcatcacgcaggtggccaagaaaaag
atgatgctgacgcatctcgttgttcggcctgggctgggctccaagactggatccatgtcc
aaacaggagcttgatgatatcctcaagtttggcaccgargagctgttcaaagatgaggcc
acagatggaggaggagacaacaaagagggagaagatagcagtgtcatccactatgacgat
aaagccattgaacgactgctggaccggaaccaggatgagactgaagacacggagctacag
ggcatgaatgaatatttgagctcattcaaagtggcccagtatgtggtgcgagaagaagaa
atgggggaggaagaggaggtggaacgggagatcataaaacaggaagaaagtgtggatccc
gactactgggagaaattgctgcggcaccattatgagcagcagcaagaagatctggcccga
aacctgggcaaaggaaaaagaattcgtaaacaggtcaactacaatgatggctcgcaggag
gaccgagattggcaggacgaccagtccgacaaccagtccgattattcggtggcctcagag
gaaggtgatgaagactttgacgaacgttcagaagctccccgcaggcccagtcgcaagggc
ctgcggaatgataaagataagccattgcctcctctgttggcccgtgttggtgggaatatt
gaagttcttggttttaatgctcgtcagcgaaaagcctttcttaatgcaattatgcgctat
gggatgccccctcaggatgcttttaccacccagtggctcgtgcgggatctgcgaggcaaa
tctgagaaggagttcaaggcttatgtctcgctttttatgcggcatttatgtgagccggga
gcagatggggccgagacctttgctgatggcgtcccccgagaaggcctgtctcgccagcat
gtccttactcggattggggttatgtccttgattcgcaagaaggttcaggagtttgaacat
gttaacgggcgctggagcatgcctgaactcgcagaagtagaggaaaataagaaaatgtcc
cagccagggtcaccgtccccaaagactcctaccccctccactcctggggacacacaaccc
aatactccagctcctgccccgcctgccgaggatgggataaaagtagaggaaaataacctc
aaagaagaagagagtgcagaggcagagaaggaggtgaagtctgtaccccctgaggccgcc
gttgagtgtacacagccccctgcccctgcctcagaggaggagaaggtcccagtggagcct
cctgagggagaggagaaagtggaaaaggcagaggtcaaggagagaacagaggaagcgatg
gagacagatccgaaaggtaatgctgatgtggagaaggtggaggagaaggcagcagttgat
ctgactcccatcgtggtggaggacaaagaagagaagaaagaagaagaggagaaaaaagag
gtgatgcttcagaatggagagacccccaaggacctgaatgatgagaagcagaagaaaaat
attaaacagcgtttcatgttcaacattgcagatggtggttttacggagctgcactccctg
tggcagaatgaggagcgggcagccactgtcaccaagaagacttacgagatctggcaccga
cgccatgactactggctactggctggcatcataaaccatggctatgcccgttggcaggac
atccagaatgatccacgctatgccatcctcaatgaacctttcaagggggaaatgaaccgt
ggcaatttcttagagatcaagaataagtttctagcccgaaggttcaagctcttagaacaa
gccctggtgattgaggagcrgctgcgtcgggcagcttacctcaacatgtcagaggaccct
tctcacccttccatggccctaaacacccgctttgctgaggtggagtgtctggcagagagt
catcagcacctgtccaaggagtccatggcaggaaacaagccagctaacgcagtcctgcac
aaagttctgaaacagctagaagaactgctgagtgacatgaaagccgatgtgactcgactc
ccagccactattgcccgaatccccccagttgctgtgaggctacagatgtcagagcgtaat
attctcagtcgcctggcaaaccgggcgcctgaaccacctccacagcaggtagcccagcag
cagtga
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integrated database retrieval system
