Bos indicus (zebu cattle): 109561279
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Entry
109561279 CDS
T04792
Symbol
COL6A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu04820
Cytoskeleton in muscle cells
biu04974
Protein digestion and absorption
biu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109561279 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109561279 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109561279 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109561279 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109561279 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109561279 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109561279 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109561279 (COL6A2)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109561279 (COL6A2)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109561279 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
109561279 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
109561279
NCBI-ProteinID:
XP_019819220
UniProt:
A0A6P5C173
LinkDB
All DBs
Position
1:148759337..148788468
Genome browser
AA seq
1027 aa
AA seq
DB search
MLRRKGAAKMLRSPCSALLLWGLLGAVHAQQQEVISPGPSDRNSCPEKADCPVHVYFVLD
TSESITMQSPTDSLLYHMQQFVLQFISQLQDELYLDQVALSWRYGGLHFSDLVEVFSPPG
SDRASFTKSLQSISSFRRGTFTDCMLANMTQEVRRHVGKGVVNFAVVITDGHVTGSPCGG
IKLQAERAREEGIRLFAVPPNLKLNEQGLRDIANTPHELYRNNYATMRPDSTEIDQDTIN
RIIKVMKHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEG
PIGFPGPKGVPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDTGDRG
PDGYVGEAGSPGERGDQGSKGDPGRPGRRGPPGENGAKGSKGYQGNNGAPGSPGLKGAKG
GPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPXGLAGEVGNKGAKGDRGLPG
PRGPQGTVGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGP
PGPEGGRGDFGSKGEPGRKGQKGEPADPGPPGEPGPRGQRGAPGPEGEPGPPGDPGLTEC
DVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDP
KSETGTRVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYN
KLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCNHEVTVTAIGIGDMFHEKHESENL
YSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPV
DIVFLLDGSERLGEQNFHKVRRFVEEVSRRLTLARKDDDPLNARVALLQFGGPREQQVAF
PLTSNLTVIQEALASARYLNSFSHVGTGIVQAINQVVQGARAGARRHAELSFVFLTDGVT
GNDSLDEAVHSMRKQNVVPTVVAVGSDVDTDVLSKISLGDPAAVFREKDYDSLAQPGFFD
RFIRWIC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcgcaagggtgctgccaagatgctccgcagcccctgctctgccctcctgctc
tgggggctcctgggggccgtccatgctcagcagcaggaggtcatcagccctggcccctcg
gacaggaatagctgccctgagaaggccgactgcccggtccacgtgtacttcgtgctggac
acgtcggagagcatcaccatgcagtcccccactgacagcctgctctaccacatgcagcag
ttcgtgctgcagttcatcagccaactgcaggatgagctctacctggaccaggtggccctg
agctggcgctacggcggcctgcacttctccgatctggtagaggtgttcagcccgccgggc
agcgaccgggcctccttcaccaagagcctgcagagcatcagctccttccgccggggcacc
ttcaccgactgcatgctggccaacatgacccaggaggtccggcggcatgtgggcaagggc
gtggtcaacttcgcggtggtcatcaccgacggtcacgtgaccggcagcccctgcgggggc
atcaagctgcaggcagagcgggcccgcgaggagggcatccggctgttcgcggtgccgccc
aacctgaagctgaatgagcagggcctgcgggacattgccaacacaccccacgagctctac
cggaacaactacgcgaccatgcggccggactccactgagatcgaccaggacaccatcaac
cgcatcatcaaggtcatgaaacatgaagcctatggagagtgctacaaggtcagctgtctg
gagatccctgggccccctggccccaagggctaccgcggacagaagggcgccaagggcaac
atgggtgagcctggagagcctggacagaaggggcgacagggagatccaggcatcgaaggc
cccattggattccctggacccaagggtgttcctggtttcaaaggcgagaagggcgagttt
ggagccgacgggcggaagggtgccccgggcctggcgggcaagaacgggacagatgggcag
aagggcaagctggggcgcattggacctcctggctgcaagggagacacyggggatcggggc
cctgatggctacgtgggggaagccggcagccctggggagcgaggagaccaaggctcaaag
ggggaccctggccgcccaggacgcagaggcccccccggggagaatggggcaaaaggaagc
aagggctatcaaggcaacaacggagccccaggaagtcctggcctgaaaggagccaagggc
gggcctgggccccgaggacccaaaggcgagcctgggcgcaggggagaccctggaaccaaa
ggcggcccaggcagtgacggccccaagggtgagaagggggaccctggtcctgaggggccc
yggggcctggctggagaggttggcaacaaaggagccaagggagatcgtggtttgcctgga
cccagaggtccccaggggactgtcggagagcctgggaaacagggatctcggggagaccct
ggtgatgctggtccccgcggagattcgggacagcctggccccaagggagaccctggcagg
cctggattcagctatcctggaccccgaggagcacctggagacaagggtgagccaggcccc
cccggccccgaggggggcagaggtgactttggctccaaaggagaacctgggaggaaaggc
cagaagggagagcctgcagatcctggtccccctggtgagcctggcccacgagggcagaga
ggagccccaggacctgagggagagcctggccccccaggagaccccggcctcacggaatgc
gacgtcatgacctacgtgcgggagacctgcgggtgctgtgactgtgagaagcgctgtggc
gccttggatgtggtgttcgtcatcgacagctctgagagcattggctacaccaacttcacc
ctggagaagaacttcgtcatcaacgtggtcaacaggctgggagccatcgccaaggacccc
aagtcggagacggggacccgcgtgggcgtcgtgcagtacagccacgagggcaccttcgaa
gccatccagctggacgacgagcgcatcgactcgctgtccagcttcaaagaggccgtcaag
aaccttgagtggattgctggtggcacctggacgccctcggccctcaagttcgcctacaac
aagctcatcaaggagagccggcgccagaagacccgcgtgttcgcggtggtcatcacagac
ggccgccacgacccccgggacgacgacctcaacctgcgggcgctgtgcaaccacgaagtg
acggtgacggccatcggcatcggggacatgttccacgagaagcacgagagcgagaacctg
tactccattgcctgcgacaagccgcagcaggtgcgcaacatgacactcttctccgacctg
gtggccgagaagttcatcgacgacatggaggacgtgctgtgcccggatccccagattgtg
tgcccggatcttccctgccaaacagagctgtacgtggcccagtgcacacagcgsccggtg
gacatcgtcttcttgctggacggctctgagcggctgggcgagcagaacttccacaaggtg
cggcgcttcgtggaggaggtatcccgacggctgaccctggcgcgcaaggacgacgacccg
ctcaacgcgcgtgtggcattgctgcagttcgggggcccgcgtgagcagcaagtggccttc
ccgctgacctccaacctgaccgtcattcaggaggcgctggcgagcgcgcgctacctcaac
tccttctctcacgtgggcacgggcatcgtgcaggccatcaatcaggtggtgcarggcgct
cgggccggggcacgccgccacgcggagctgtccttcgtgttcctcaccgacggcgtcaca
ggcaacgacagcctggatgaggcggtacactccatgcgcaagcagaacgtggtgcccacc
gtggtggccgtgggtagcgacgtggacacggatgtgctctccaagatcagcctgggcgac
ccggccgccgtcttccgcgagaaagactacgacagcctggcccagcccggcttcttcgac
aggttcatccgctggatctgctag
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integrated database retrieval system
