Bos indicus (zebu cattle): 109561303
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Entry
109561303 CDS
T04792
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109561303 (SOX30)
Transcription factors [BR:
biu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109561303 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109561303
NCBI-ProteinID:
XP_019819238
UniProt:
A0A6P5C172
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Position
7:complement(68887778..68929599)
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AA seq
766 aa
AA seq
DB search
MERARPEQPPQQRQLPRATPPRPLRPAPPPLPVEGASFRAAXXEPSPSPPTPCAAAIXTV
ASSCGEPSASGVQPAARRLLQVKPEQVLLLPPGPPLPQAREESAATSPAQARLLQLRPEL
LLLPPPPPXSEGIPCRPELHPLQPRALHVKAEKQEPGPGLDLLAGPRRAVEACPKTSRTV
KAEGSGPLNSRRGEEKKGKLEAEEIVSYAAKGEEGKSLAVLREGVIKTEAPERLREDCRL
STEPASNGLAHGNKDVILTQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIRL
TKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMV
WARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVY
QPRPGKRKRFPLSVSSVFSGTTQNIISTNPTIYPYRSPTYSVVIPSLQNAITHPVGESPP
TIQLPTPAVQRPSPITLFQPSVSSTAQVAVQAPSLPLRPALPPQRFAGPSQADTHQLHSG
VSRSVKRPTPVSLESTNRIPTSASPAHSRFATSTIQPPKEYPSVSTCPRSTPISQAPPIP
HSHIYQPSPLGHPAALFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPE
CLGYYEDRYQKHEAMFSALNRDYPFRDYPDERAHNEDSRSCENMDGTSYYNSHCHSGEEY
LNPIPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcccggccggagcagccgcctcagcagcgccaactgccgcgggcgaccccg
ccgcgcccgctgcgccctgctccgcccccgctgcccgtcgagggcgcctccttccgggca
gcgnnnnctgagccctctccgtcgccgcccaccccgtgcgcggccgccattrcgaccgtc
gcctcgtcgtgtggggaaccctctgcgtcgggcgtacagccagcggcacgacggctgctg
caggtgaaaccggagcaggtgttattgctgccacccgggccaccactgcctcaggcccgg
gaggaaagcgccgccacctctcccgcgcaggcgcggctgctgcagctgaggcccgagctg
ctcctgctgccgccgccgccccccscatctgagggcatcccctgcaggcctgagttgcac
ccgttgcagccccgagcgctgcacgttaaggcggagaagcaggagccgggacccggcttg
gatctgttggctgggcctcggagggccgtcgaggcgtgccctaaaacctccaggacggtg
aaggcagaaggctctgggcccctcaacagccgccgaggggaggagaagaagggcaagttg
gaggcggaggagatcgtaagctacgcagcaaaaggcgaagaaggcaaaagcctggcagtc
ctcagagaaggagtcatcaaaacggaggcgcctgagagacttcgagaggactgcaggctc
agtacagagcccgcgtccaatggcctggcccatggcaacaaggatgtcatcctgacccag
ccgtccagtgcctttgggccacatcagcaagacctcaggatccctttaactcttcacacc
gtaccccctggggcccggatccagtttcagggacctccaccttcagagctgatacgattg
accaaggtcccgttgacaccagtgcctattaaaatgcagtccttactggagccttctgta
aaaattgaaaccaaagatgtcccgctcacggtgcttccctcagatgcaggaataccagat
actcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtt
tgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgcagaa
atcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctat
tatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtttat
caacctcgtccagggaagcgaaaacgcttccctctaagcgtttctagtgtattttctggt
accacacagaatatcatctctacaaatccaacaatttatccttatcgctcacctacctac
tctgtggtaattcccagcctacagaacgccatcactcatccagttggtgaatctccacca
accatccagctgcccacacctgcagtccagcgtccaagccccatcacacttttccagccc
agcgtctccagtactgcccaggtggctgtccaggctccaagtctgcccctccgtccagca
ctcccaccccagcgctttgctgggccctcccaagcggacactcatcagctgcattctgga
gtcagtcgctctgtgaagagacccactcctgtttctctggagagcaccaacaggattccg
actagtgcaagtcctgcccattccagatttgcaacctcaaccatccaacctcccaaggag
tatcccagcgtttccacttgtccgagaagtactccaatttcccaggctcctcctattcca
cactcacacatctaccagccctctccccttggccatccagctgcattgtttgggacacca
ccaagattctcttttcatcacccttacttcctacctggacctcactacttcccatcaagc
acgtgcccttatagtcggccgccctttggctatggaaattttccaagttcaatgccagaa
tgccttggttattatgaagacaggtaccaaaaacatgaggctatgttttcagctttaaat
agagactatccttttagagactacccagatgaacgtgctcacaatgaagattctcgaagt
tgtgagaacatggatgggacttcttactataacagtcattgccacagtggggaagaatac
ttaaatcccatccctcagctggacattggagccttggagaatgtcttcacagccccgaca
tcaactccctctagtatccagcaagtcaatgtcactgacagtgatgaggaggaagaagaa
aaagtgctcaggaatttataa
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