Bos indicus (zebu cattle): 109561608
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Entry
109561608 CDS
T04792
Symbol
SMARCA4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu04714
Thermogenesis
biu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109561608 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109561608 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109561608 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109561608 (SMARCA4)
03036 Chromosome and associated proteins [BR:
biu03036
]
109561608 (SMARCA4)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109561608 (SMARCA4)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109561608 (SMARCA4)
Chromatin remodeling factors
BAF complex
109561608 (SMARCA4)
PBAF complex
109561608 (SMARCA4)
GBAF(ncBAF) complex
109561608 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
109561608
NCBI-ProteinID:
XP_019819739
UniProt:
A0A6P5C2A0
LinkDB
All DBs
Position
7:13891627..13967400
Genome browser
AA seq
1639 aa
AA seq
DB search
MSTPDPALGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSIMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYTQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQPQMPALPPPSVSATGPGPSPGPAPPN
YSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPT
GRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQ
EREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDT
ALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKE
YHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK
RLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE
TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE
EEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGL
QSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ
TIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQL
RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL
LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRL
HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKG
KGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI
LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKXFNEPGSE
YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGS
ASFAHTAPPPAGVNPDSEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEA
RNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQW
LKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPA
EKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFK
KIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKED
DSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD
DDSEEEQEEDRSGSGSEED
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccggacccagccctgggcggaactcctcggccaggcccttctcccggcccg
ggcccctcccccggagccatgttgggccccagcccgggcccctcccctggctccgcccac
agcatcatgggacccagcccagggcctccctcggcaggacaccccatccctacccagggc
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacacccagatgaaggggatggggatgcggtca
gggggccatgcaggcatggggcccccaccaagccccatggaccagcactcccaaggttac
ccctcgcccctgggcggctctgagcacgcctccagtccggttccagccagtggcccgtcc
tcgggcccacagatgtcatctgggcctggaggggccccgctggatggtgctgacccgcag
gctttggggcagcagaaccggggcccaacacccttcaaccagaaccagctgcaccagctc
agagcgcagatcatggcctacaagatgctggcccgggggcagccccttcccgaccacctg
cagatggccgtgcagggcaagcggccgatgcctgggatgcagccacagatgccagctcta
cctccaccctccgtgtccgcaacaggacccgggcccagccctggaccagcacctccaaat
tacagcaggcctcatggtatgggagggcccaacatgccccctccaggaccctcaggcgtg
cctcctgggatgcccggccagccccccggagggcctcccaagccctggcctgaaggaccc
atggcgaatgctgctgcccccacgagcacacctcagaagctgatacccccacagccgaca
gggcgcccctcacccgcaccccctgctgtcccacccgctgcctcccctgtgatgccgccc
cagacacagtcaccggggcaaccagcccagcctgcccccatggtgccgctccaccagaag
cagagccgcatcaccccgatccagaagccgcggggcctggaccccgtggagatcctgcag
gaacgggaatacaggctgcaggctcgcatcgcacaccgaattcaggaacttgaaaacctt
cccgggtccctggccggggatttgcgaaccaaagctaccatcgagctcaaggccctcaga
ctgctgaacttccagaggcagctgcggcaggaggtggtggtgtgcatgaggagggacaca
gccctggagacggccctcaacgccaaggcctataagcgcagcaagcggcagtccctgcgc
gaggcccgcatcaccgagaagctggagaagcagcagaagatcgagcaggagcgcaagcgc
cggcagaagcaccaggaatacctcaacagcattcttcagcatgccaaggatttcaaggaa
tatcacaggtcggtcacaggcaaaatccagaagctcacaaaggcggtggccacgtaccac
gccaacaccgagcgggaacagaagaaggagaacgaaagaatcgagaaggagagaatgcgg
aggctcatggccgaggacgaggagggctaccgaaaactcatcgaccagaagaaggacaag
cgcctggcctacctcctgcagcagacagatgaatacgtagctaacctcacggagctggtg
cggcagcacaaggccgcccaggtcgccaaggagaagaaaaagaagaagaagaagaagaag
gcagaaaatgctgaaggacagacgcctgcgatcggacctgatggcgagcctctagacgag
accagccaaatgagcgacctcccggtgaaagtgatccacgtggagagtgggaagatcctc
acaggcacagatgcacccaaggccgggcagttggaggcctggctggagatgaacccgggg
tatgaagtagctccaagatctgatagtgaagagagtggctcagaagaagaggaggaggag
gaggaggaggagcagccgcagcccgcgcagcccccaaccctgcccgtggaggagaagaag
aagattccagatcccgacagcgatgatgtctccgaggtggatgcccggcacatcattgag
aacgccaagcaagatgtggacgatgagtacggcgtgtctcaggccctcgctcgtggcctg
cagtcctattatgctgtggcccacgccgttaccgagcgggtagacaagcagtcggcgctt
atggtcaatggcgtgctcaagcagtaccagatcaaaggcttggagtggctggtgtccctg
tacaacaacaacctgaatggcatcctggctgacgagatgggcctgggcaagaccatccag
accatcgcgctcatcacgtacctcatggagcacaagcgcatcaacgggcccttcctcatc
atagtgcccctctcaaccctctccaactgggcctacgaatttgacaagtgggccccctcg
gtggtgaaggtgtcctacaagggctccccagcagccagacgtgctttcgtcccccagctc
cgcagtggaaagttcaacgtcttgctgacgacatatgagtacatcattaaggacaagcac
atccttgcaaagatccgctggaagtacatgatcgtggacgaaggccaccgcatgaagaac
caccactgcaagctgacgcaggtcctcaacacgcactacgtggcgccccgccgcctgctg
ctgacgggcacaccactgcagaacaagctgcccgagctctgggcgctgctcaacttcctg
ctgcccaccatcttcaagagctgcagcacctttgagcagtggttcaacgcgcccttcgcc
atgactggggagaaggtggacctgaacgaggaggaaaccatcctcatcatccgccgtctc
cacaaagtgctgcggcccttcctgctccggcggctcaagaaggaagtggaggctcagttg
cctgaaaaggtggagtacgtcatcaagtgcgacatgtcggccctgcagcgcgtgctctat
cggcacatgcaggccaagggggtactgctgaccgacggctccgagaaggacaagaagggc
aaaggtggtaccaagaccctgatgaacaccatcatgcagctgaggaagatctgtaaccac
ccctacatgttccagcacatcgaggagtccttttccgagcacttggggtttaccggcggc
attgtccaagggctggacctgtaccgagcctcagggaaattcgagctgctcgatagaatt
cttcccaaactccgggccaccaaccacaaagtgctgctgttctgtcagatgacctccctc
atgaccatcatggaagactattttgcatatcgcggctttaaatacctcaggctcgatgga
accacgaaagcggaggaccgggggatgctgctgaaanacttcaacgagcccggctccgag
tacttcatcttcctgctcagcacccgggccgggggcctgggtctgaacctccagtcggct
gacactgtgatcatttttgacagtgactggaacccccaccaggacctgcaggcacaggac
cgcgcccaccgcatcgggcagcagaatgaggtgcgggtgctccgcctgtgcacggtcaac
agcgtggaggagaagatcctggccgcggccaagtacaagctcaacgtggaccagaaggtg
atccaggccggcatgtttgaccagaagtcctccagccacgagcggcgtgccttcctgcag
gccatcctggagcacgaggagcaggatgagagcagacactgcagcacgggcagcggcagt
gccagcttcgcccacactgcccctccgccagcgggcgtcaaccccgactcggaggagcca
cctctaaaggaagaagacgaggtgcctgacgatgagacggtgaaccagatgatagcccgg
cacgaggaggagttcgacctgttcatgcgcatggacctggaccgccggcgtgaggaggcc
cgcaatcccaagcggaagccgcggctcatggaggaggacgagctcccctcgtggataatc
aaggacgatgccgaggtggagcggctgacctgtgaggaggaggaggagaagatgttcggc
cgtggctcccgtcaccgcaaggaggtggactacagtgactcgctgactgagaagcagtgg
ctcaaggccatcgaggagggcacgctggaggagatcgaagaggaggtccggcagaagaaa
tcgtcacggaagcgcaagcgagacagcgacgccggcccctccaccccgaccaccagcacc
cgcagccgcgataaggacgacgagagcaagaagcagaagaagcgcggccggccacctgct
gagaagctctcccctaacccacccaacctcaccaagaagatgaagaagatcgtggatgcc
gtgatcaagtacaaggacagcagcagtggacgccagctcagcgaggtgttcatccagctg
ccgtcccgcaaggagctgcccgagtactacgagctcatccgcaagcctgtggacttcaag
aagataaaggagcgcatccgcaaccacaagtaccgcagcctcaacgacctggagaaggac
gtgatgctgctgtgtcagaacgcgcagaccttcaacctggagggctccctgatctatgaa
gactccatcgtcctgcagtcggtcttcaccagcgtgcggcagaaaatcgagaaggaggac
gacagtgaaggggaggagagcgaggaggaggaggagggcgaggaggaaggctccgagtca
gagtctcgctcagtcaaagtgaagatcaagcttggccggaaggagaaggcccaggatcgg
ctcaaggggggccggcggcggccgagccgtgggtccagggccaagccagtggtgagcgac
gacgayagcgaggaggagcaggaggaggaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
